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Job DescriptionP0AD68
Confidence98.74%DateThu Jan 5 11:20:08 GMT 2012
Rank74Aligned Residues241
% Identity27%Templated1w79a1
SCOP infobeta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like Dac-like
Resolution1.8

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   238.240.........250.........260.........270.........280.........290.........300.........310.......
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Query Sequence  ERLQALVYRELNNAVAFNKAESGSAVLVDVNTGEVLAMANSPSYNPNNLSGTPKEAMRNRTITDVFEPGSTVKPMVVMTA
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Template Sequence  TELREDIDAILEDPA. . LEGAVSGVVVVDTATGEELYSR. . . . . . . . . . . . . . . . . . . . . DGGEQLLPASNMKLFTAAAA
Template Known Secondary structure  TT
GG..GTT
TTT

.....................STT

B

GGG
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   3......10....... ..20.........30......... 40.........50.........
 
   318.320.........330....... ..340.........350.
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Query Sequence  LQRGVVRENSVLNTIPYRIN. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GHEIKDVARYSELT. . . .
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Template Sequence  LEV. . LGADHSFGTEVAAESAPGRRGEVQDLYLVGRGDPTLSAEDLDAMAAEVAASGVRTVRGDLYADDTWFDSERLVDD
Template Known Secondary structure  ..T
TT
SS


TTSS

S
TT

TT


S

TTS
S

S
TT
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   60.. .......70.........80.........90.........100.........110.........120.........130.......
 
  
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Conservation 
   
    
 
    
 
      
 
   
       
                 
   
                  
Template Sequence  WWPEDEPYAYSAQISALTVAHGERFDTGVTEVSVTPAAEGEPADVDLGAAEGYAELDNRAVTGAAGSANTLVIDRPVGTN
Template Known Secondary structure  S
GGGTTBGGG



SS

TTTTS

STTSB

GGGTTTS


TT






TT

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   138.140.........150.........160.........170.........180.........190.........200.........210.......
 
   352......
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LTGVLQK
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Template Sequence  TIAVTGSLPADAAPVTALRTVDEPAALAGHLFEEALESNGVTVKGDVGLGGVPADWQDAEVLADHTSAELSEILVPFMKF
Template Known Secondary structure  STTS


S
TT

S




S

TT
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   218.220.........230.........240.........250.........260.........270.........280.........290.......
 
   359360.........370.. .......380.........390.........400.........410.........420......
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Query Sequence  SSNVGVSKLALAMP. . . . . . . . . . . . SSALVDTYSRFGLGKATNLGLVGERSGLYPQKQRWSDIERATFSFGYGLMVTPL
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Template Sequence  SNNGHAEMLVKSIGQETAGAGTWDAGLVGVEEALSGLGV. DTAGLVLND. . . . . . . . . . . . . . . . . . GSGLSRGNLVTAD
Template Known Secondary structure  T
S

STT
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TT
B
S
..................SSS
STT
BB
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   298.300.........310.........320.........330...... ...340..... ....350........
 
   427..430.........440.........450.........460.........470........ .480.. .......490......
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Query Sequence  QLARVYATIGSYGIYRPLSITKVDPPVPGERVFPESIVRTVVHMMESVALPG. . . . . . . GGGV. . . KAAIKGYRIAIKTG
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Template Sequence  TVVDLLGQAGSAPW. . . . . . . . . . . . . . . . . . . . . . . . . . AQTWSASLPVAGESDPFVGGTLANRMRGTAAEGVVEAKTG
Template Known Secondary structure  TSTT..........................S
BTT
SSGGGTTSSTTSTTTTT


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   359360.........370.. .......380.........390.........400.........410..
 
   497..500.........510.........520.........530.........540.........550.........560.....
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Query Sequence  TAKKVGPDGRYINKYIAYTAGVAPASQPRFALVVVINDPQAGKYYGGAVSAPVFGAIMGGVLRTMNIEP
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Template Sequence  TM. . . . . . . . . . . SGVSALSGYVPGPEGELAFSIVNNGH. . . . . . SGPAPLAVQDAIAVRLAEYAGHQA
Template Known Secondary structure  ...........TT

TT



......SSS

TT


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   413. .....420.........430.........440 .........450.........460....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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