Job Description P0AD68 Confidence 100.00% Date Thu Jan 5 11:20:08 GMT 2012 Rank 12 Aligned Residues 312 % Identity 19% Template d1vqqa3 SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 1.80

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		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.												.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	D	E	R	L	Q	A	L	V	Y	R	E	L	N	N	A	V	A	F	N	K	A	E	S	G	S	A	V	L	V	D	V	N	T	G	E	V	L	A	M	A	N	S	P	S	Y	N	P	N	N	L	S	G	T	P	K	.	.	.	.	.	.	.	.	.	.	.	E	A	M	R	N	R	T	I	T	D	V	F	E
Query Conservation																																																										.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.
Template Sequence		I	D	A	K	V	Q	K	S	I	Y	N	N	M	.	.	.	.	.	.	.	K	N	D	Y	G	S	G	T	A	I	H	P	Q	T	G	E	L	L	A	L	V	S	T	P	S	Y	D	V	Y	P	F	M	Y	G	M	S	N	E	E	Y	N	K	L	T	E	D	K	K	E	P	L	L	N	K	F	Q	I	T	T	S
Template Known Secondary structure															.	.	.	.	.	.	.	T	T	S	S								T	T	T	T									S				S																	T		T	T		T	T	S		T	T	T	S		B
Template Predicted Secondary structure															.	.	.	.	.	.	.
Template SS confidence
		328	.	330	.	.	.	.	.	.	.	.	.	340								.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.		.	.	.	.	.	.	340	.	.	.	.	.							.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure																															.													.	.	.	.	.	.
Query SS confidence																															.													.	.	.	.	.	.
Query Sequence		P	G	S	T	V	K	P	M	V	V	M	T	A	L	Q	R	G	V	V	R	E	N	S	V	L	N	T	I	P	.	Y	R	I	N	G	H	E	I	K	D	V	A	.	.	.	.	.	.	R	Y	S	E	L	T	L	T	G	V	L	Q	K	S	S	N	V	G	V	S	K	L	A	L	A	M	P	S	S	A	L	V
Query Conservation																															.													.	.	.	.	.	.
Alig confidence																															.													.	.	.	.	.	.
Template Conservation
Template Sequence		P	G	S	T	Q	K	I	L	T	A	M	I	G	L	N	N	K	T	L	D	D	K	T	S	Y	K	I	D	G	K	G	W	Q	K	D	K	S	W	G	G	Y	N	V	T	R	Y	E	V	V	N	G	N	I	D	L	K	Q	A	I	E	S	S	D	N	I	F	F	A	R	V	A	L	E	L	G	S	K	K	F	E
Template Known Secondary structure			G	G	G												T	T	S	S		T	T							S	S				S	S	G	G	G	T	T						S	S														T	T
Template Predicted Secondary structure
Template SS confidence
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
		378	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420		.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.		440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.
Predicted Secondary structure																																													.																				.
Query SS confidence																																													.																				.
Query Sequence		D	T	Y	S	R	F	G	L	G	K	A	T	N	L	G	L	V	G	E	R	S	G	L	Y	P	Q	K	Q	R	W	S	D	I	E	R	A	T	F	S	F	G	Y	G	.	L	M	V	T	P	L	Q	L	A	R	V	Y	A	T	I	G	S	Y	G	.	I	Y	R	P	L	S	I	T	K	V	D	P	P	V	P	G
Query Conservation																																													.																				.
Alig confidence																								.																					.																				.
Template Conservation																								.
Template Sequence		K	G	M	K	K	L	G	V	G	E	D	I	P	S	D	Y	P	F	Y	N	A	Q	.	I	S	N	K	N	L	D	N	E	I	L	L	A	D	S	G	Y	G	Q	G	E	I	L	I	N	P	V	Q	I	L	S	I	Y	S	A	L	E	N	N	G	N	I	N	A	P	H	L	L	K	D	T	K	N	K	V	W	K
Template Known Secondary structure							T	T	T	T	S					S	S						B	.	S		S	S				S									T	T		S	S		B	B											G	G	G	T	T	T						B			T	T	S
Template Predicted Secondary structure																								.
Template SS confidence
		481	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.		.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.
		456	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	V	F	P	E	S	I	V	R	T	V	V	H	M	M	E	S	V	A	L	P	G	G	G	G	V	K	A	A	I	K	G	Y	R	I	A	I	K	T	G	T	A	K	K	V	G	P	D	G	R	Y	I	N	K	Y	I	A	Y	T	A	G	V	A	P	A	S	Q	P	R	F	A	L	V	V	V	I	N	D	P
Query Conservation
Alig confidence																								.																							.	.	.	.	.	.	.														.
Template Conservation																								.																							.	.	.	.	.	.	.														.
Template Sequence		K	N	I	I	S	K	E	N	I	N	L	L	T	D	G	M	Q	Q	V	V	N	K	.	T	H	K	E	D	I	Y	R	S	Y	A	N	L	I	G	K	S	G	T	A	E	L	.	.	.	.	.	.	.	K	G	R	Q	I	G	W	F	I	S	Y	D	K	.	D	N	P	N	M	M	M	A	I	N	V	K	D	V
Template Known Secondary structure					S																		T	.	T	T	T	T	T	T			T	T	S												.	.	.	.	.	.	.													T	.	T	S		S
Template Predicted Secondary structure																								.																							.	.	.	.	.	.	.														.
Template SS confidence
		560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.		.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.								.	.	.	.	.	.	610	.	.	.	.	.	.		.	.	.	620	.	.	.	.	.	.	.	.	.	630
		536	.			.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		Q	A	.	.	G	K	Y	Y	G	G	A	V	S	A	P	V	F	G	A	I	M	G	G	V	L	R	T	M	N	I	E
Query Conservation				.	.
Alig confidence				.	.
Template Conservation
Template Sequence		Q	D	K	G	M	A	S	Y	N	A	K	I	S	G	K	V	Y	D	E	L	Y	E	N	G	N	K	K	Y	D	I	D
Template Known Secondary structure		T	T	T	T	T																T	G	G	G	T	S				T	T
Template Predicted Secondary structure
Template SS confidence
		637	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions