Job Description P0AD68 Confidence 100.00% Date Thu Jan 5 11:20:08 GMT 2012 Rank 32 Aligned Residues 169 % Identity 26% Template d1vqqa2 SCOP info Penicillin binding protein dimerisation domain Penicillin binding protein dimerisation domain Penicillin binding protein dimerisation domain Resolution 1.80

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		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.			.
Predicted Secondary structure																																																																															.	.
Query SS confidence																																																																															.	.
Query Sequence		M	R	S	L	R	V	Q	Q	V	S	T	S	R	G	M	I	T	D	R	S	G	R	P	L	A	V	S	V	P	V	K	A	I	W	A	D	P	K	E	V	H	D	A	G	G	I	S	V	G	D	R	W	K	A	L	A	N	A	L	N	I	P	L	D	Q	L	S	A	R	I	N	A	N	P	K	G	R	.	.	F
Query Conservation																																																																															.	.
Alig confidence																																														.	.	.	.	.	.	.																											.	.
Template Conservation																																														.	.	.	.	.	.	.
Template Sequence		D	Q	S	I	H	I	E	N	L	K	S	E	R	G	K	I	L	D	R	N	N	V	E	L	A	N	T	G	T	A	Y	E	I	G	I	V	P	K	N	V	S	K	K	D	.	.	.	.	.	.	.	Y	K	A	I	A	K	E	L	S	I	S	E	D	Y	I	K	Q	Q	M	D	Q	N	W	V	Q	D	D	T	F
Template Known Secondary structure																				T	T																	G	G	G			T	T	T	.	.	.	.	.	.	.									T											T	S	T	T			T	T
Template Predicted Secondary structure																																														.	.	.	.	.	.	.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.								.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.																		.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	Y	L	A	R	Q	V	N	P	D	M	A	D	Y	I	K	K	L	K	L	P	G	I	H	L	R	E	E	S	R	R	Y	Y	P	S	G	E	V	T	A	H	L	I	G	F	T	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	S	Q	G	I	E	G	V	E	K	S	F	D	K	W
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.
Template Sequence		V	P	L	K	T	V	K	K	M	D	E	Y	L	S	D	F	.	A	K	K	F	H	L	T	T	N	E	T	E	S	R	N	Y	P	L	E	K	A	T	S	H	L	L	G	Y	V	G	P	I	N	S	E	E	L	K	Q	K	E	Y	K	G	Y	K	D	D	A	V	I	G	K	K	G	L	E	K	L	Y	D	K	K
Template Known Secondary structure								S			S							.				T	T												T	T	G	G	G	G												T	T	G	G	G	S	G	G	G	T	T			T	T						S						T
Template Predicted Secondary structure																		.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	G	Q	P	G	E	R	I	V	R	K	D	R	Y	G	R	V	I	E	D	I	S	S	T	D	S	Q	A	A	H	N	L	A	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Q	H	E	D	G	Y	R	V	T	I	V	D	D	S	N	T	I	A	H	T	L	I	E	K	K	K	K	D	G	K	D	I	Q	L	T
Template Known Secondary structure					B																								B
Template Predicted Secondary structure
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions