Job Description P0AD68 Confidence 100.00% Date Thu Jan 5 11:20:08 GMT 2012 Rank 11 Aligned Residues 334 % Identity 25% Template d1rp5a4 SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 3.00

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		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.		.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		S	I	D	E	R	L	Q	A	L	V	Y	R	E	L	N	N	A	V	A	F	N	K	A	E	S	G	S	A	V	L	V	D	V	N	T	G	E	V	L	A	M	A	N	S	P	S	Y	N	P	N	N	L	S	G	T	P	K	E	A	.	M	R	N	R	T	I	T	D	V	F	E	P	G	S	T	V	K	P	M	V
Query Conservation																																																													.
Alig confidence																																																													.
Template Conservation
Template Sequence		T	I	S	S	P	L	Q	S	F	M	E	T	Q	M	D	A	F	Q	E	K	V	K	G	K	Y	M	T	A	T	L	V	S	A	K	T	G	E	I	L	A	T	T	Q	R	P	T	F	D	A	D	T	K	E	G	I	T	E	D	F	V	W	R	D	I	L	Y	Q	S	N	Y	E	P	G	S	T	M	K	V	M	M
Template Known Secondary structure																									S									T	T	T		B								S			B	T	T	T	T	B	T			S	S						T	T	T	S			B			G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.							.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.
Query Sequence		V	M	T	A	L	Q	R	G	V	V	R	E	N	S	V	L	N	T	I	P	Y	R	I	N	G	H	E	I	K	D	V	.	.	.	.	.	.	A	R	Y	S	E	L	T	L	T	G	V	L	Q	K	S	S	N	V	G	V	S	K	L	A	L	A	M	P	S	S	A	L	V	D	T	Y	S	R	F	G	L	G	K
Query Conservation																																	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.
Template Conservation
Template Sequence		L	A	A	A	I	D	N	N	T	F	P	G	G	E	V	F	N	S	S	E	L	K	I	A	D	A	T	I	R	D	W	D	V	N	E	G	L	T	G	G	R	M	M	T	F	S	Q	G	F	A	H	S	S	N	V	G	M	T	L	L	E	Q	K	M	G	D	A	T	W	L	D	Y	L	N	R	F	K	F	G	V
Template Known Secondary structure									T				T	T						S					T	T										T	T	S		S													T																								T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.		440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.											.
Predicted Secondary structure																																																						.																	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.																	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	T	N	L	G	L	V	G	E	R	S	G	L	Y	P	Q	K	Q	R	W	S	D	I	E	R	A	T	F	S	F	G	Y	G	L	M	V	T	P	L	Q	L	A	R	V	Y	A	T	I	G	S	Y	G	.	I	Y	R	P	L	S	I	T	K	V	D	P	P	V	P	G	.	.	.	.	.	.	.	.	.	.	E
Query Conservation																																																						.																	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.																																		.																	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.
Template Sequence		P	T	R	F	G	L	T	D	E	Y	A	G	Q	L	P	A	.	.	.	D	N	I	V	N	I	A	M	S	A	F	G	Q	G	I	S	V	T	Q	T	Q	M	L	R	A	F	T	A	I	A	N	D	G	V	M	L	E	P	K	F	I	S	A	L	Y	D	P	N	D	Q	S	V	R	K	S	Q	K	E	I	V	G
Template Known Secondary structure						S		S	S					B				.	.	.	S	S								T	T	T		S		B	B														T	T	T						B								T	T	T	T
Template Predicted Secondary structure																		.	.	.
Template SS confidence
		424	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.				440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500
		457	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.										.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.		.	.	.	.	.				.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.																						.						.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.																						.						.	.	.
Query Sequence		R	V	F	P	E	S	I	V	R	T	V	V	H	M	M	E	S	V	A	L	P	G	G	G	G	.	.	.	.	.	.	.	.	.	V	K	A	A	I	K	G	Y	R	I	A	I	K	T	G	T	A	K	K	V	G	.	P	D	G	R	Y	.	.	.	I	N	K	Y	I	A	Y	T	A	G	V	A	P	A	S	Q
Query Conservation																											.	.	.	.	.	.	.	.	.																						.						.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.																						.						.	.	.
Template Conservation
Template Sequence		N	P	V	S	K	E	A	A	S	V	T	R	D	H	M	V	M	V	G	T	D	P	T	Y	G	T	M	Y	N	H	S	T	G	K	A	T	V	N	V	P	G	Q	N	V	A	L	K	S	G	T	A	E	I	A	D	E	K	N	G	G	Y	L	T	G	S	T	N	N	I	F	S	V	V	S	M	H	P	A	E	N
Template Known Secondary structure				S																			T	T	T		T	T	B		T	T	T	S	S	B	S	S		B	T	T	B												B		T	T	T	S	S	B			S	S	S	S										S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		501	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580
		524	.	.	.	.	.	530	.	.	.	.	.	.	.	.		.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		P	R	F	A	L	V	V	V	I	N	D	P	Q	A	G	.	K	Y	Y	G	G	A	V	S	A	P	V	F	G	A	I	M	G	G	V	L	R	T	M	N	I	E	P	D	A	L	T	T	G	D
Query Conservation																	.
Alig confidence																	.																	.
Template Conservation																																		.
Template Sequence		P	D	F	I	L	Y	V	T	V	Q	Q	P	E	H	Y	S	G	I	Q	L	G	E	F	A	N	P	I	L	E	R	A	S	.	A	M	K	E	S	L	N	L	Q	T	T	A	K	A	L	E	Q
Template Known Secondary structure			S									S		S	S																			.			T	T	T	T	T	T	T	S			G	G	G	G	S
Template Predicted Secondary structure																																		.
Template SS confidence
		581	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.		.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions