Job Description P0AD68 Confidence 99.93% Date Thu Jan 5 11:20:08 GMT 2012 Rank 45 Aligned Residues 249 % Identity 20% Template d1m40a_ SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 0.85

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		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320				.	.
Predicted Secondary structure																																																																													.	.	.
Query SS confidence																																																																													.	.	.
Query Sequence		R	E	L	N	N	A	V	A	F	N	K	A	E	S	G	S	A	V	L	V	D	V	N	T	G	E	V	L	A	M	A	N	S	P	S	Y	N	P	N	N	L	S	G	T	P	K	E	A	M	R	N	R	T	I	T	D	V	F	E	P	G	S	T	V	K	P	M	V	V	M	T	A	L	Q	R	.	.	.	G	V
Query Conservation																																																																													.	.	.
Alig confidence																	.														.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Template Conservation																	.														.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	K	V	K	D	A	E	D	Q	L	G	A	R	V	G	.	Y	I	E	L	D	L	N	S	G	K	I	L	E	.	.	.	.	.	S	F	R	P	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	F	P	M	M	S	T	F	K	V	L	L	C	G	A	V	L	S	R	V	D	A	G	Q
Template Known Secondary structure												T	S				.						T	T	T						.	.	.	.	.			S	T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					G	G	G															T	T	S
Template Predicted Secondary structure																	.														.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.						.	60	.	.	.	.																	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		323	.	.	.	.	.	.	330	.	.	.		.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.					.	360	.	.	.	.	.	.	.	.	.	370	.		.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure													.																										.	.	.	.														.
Query SS confidence													.																										.	.	.	.														.
Query Sequence		V	R	E	N	S	V	L	N	T	I	P	.	Y	R	I	N	G	H	E	I	K	D	V	A	R	Y	S	E	L	T	L	T	G	V	L	Q	K	.	.	.	.	S	S	N	V	G	V	S	K	L	A	L	A	M	.	P	S	S	A	L	V	D	T	Y	S	R	F	G	L	G	K	A	T	N	L	G	L	V	G	E
Query Conservation													.																										.	.	.	.														.
Alig confidence													.																										.	.	.	.														.																		.	.	.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.	.	.
Template Sequence		E	Q	L	G	R	R	I	H	Y	S	Q	N	D	L	V	E	Y	S	P	V	T	E	K	H	L	T	D	G	M	T	V	R	E	L	C	S	A	A	I	T	M	S	D	N	T	A	A	N	L	L	L	T	T	I	G	G	P	K	E	L	T	A	F	L	H	N	M	G	D	H	V	T	.	.	.	.	.	.	.	.
Template Known Secondary structure				T	T							G	G	G			S			T	T	G	G	G		T	T	T														S														T	S											T	T		S	S		.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	G	L	Y	P	Q	K	Q	R	W	S	D	I	E	R	A	T	F	S	F	G	Y	G	L	M	V	T	P	L	Q	L	A	R	V	Y	A	T	I	G	S	Y	G	I	Y	R	P	L	S	I	T	K	V	D	P	P	V	P	G	E	R	V	F	P	E	S	I	V	R	T	V	V	H	M	M	E	S	V	A	L
Query Conservation
Alig confidence		.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	R	L	D	R	W	E	P	E	L	N	E	A	I	P	N	D	E	R	D	T	T	T	P	A	A	M	A	T	T	L	R	K	L	L	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	L	L	T	L	A	S	R	Q	Q	L	I	D	W	M	E	A	D	K	V
Template Known Secondary structure		.	.	.	.	.	.						T	T	G	G	G				T	T			T	T																	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S																S	S
Template Predicted Secondary structure		.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
								161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.																			.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		477	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	G	G	G	V	K	A	A	I	K	G	Y	R	I	A	I	K	T	G	T	A	K	K	V	G	P	D	G	R	Y	I	N	K	Y	I	A	Y	T	A	G	V	A	P	A	S	Q	P	R	F	A	L	V	V	V	I	N	D	P	Q	A	G	K	Y	Y	G	G	A	V	S	A	P	V	F	G	A	I	M	G	G
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.																															.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.																															.	.	.	.
Template Sequence		A	G	P	L	L	R	S	A	L	P	A	G	W	F	I	A	D	K	S	G	A	G	.	.	.	.	.	.	.	.	.	E	R	G	S	R	G	I	I	A	A	L	G	P	D	G	K	P	S	R	I	V	V	I	Y	T	T	G	S	Q	A	.	.	.	.	T	M	D	E	R	N	R	Q	I	A	E	I	G	A	S
Template Known Secondary structure			T	T	T	G	G	G	G			T	T											.	.	.	.	.	.	.	.	.	S	T	T										S	T	T												S				.	.	.	.
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.																															.	.	.	.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.										.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.					.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
		557	.	.	560	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	R	T	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	I	K	H	W
Template Known Secondary structure					T
Template Predicted Secondary structure
Template SS confidence
		286	.	.	.	290

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions