Job Description P0AD68 Confidence 100.00% Date Thu Jan 5 11:20:08 GMT 2012 Rank 25 Aligned Residues 233 % Identity 19% Template d1k38a_ SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 1.50

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	R	E	L	N	N	A	V	A	F	N	K	A	E	S	G	S	A	V	L	V	D	V	N	T	G	E	V	L	A	M	A	N	S	P	S	Y	N	P	N	N	L	S	G	T	P	K	E	A	M	R	N	R	T	I	T	D	V	F	E	P	G	S	T	V	K	P	M	V	V	M	T	A	L	Q	R	G	V	V	R
Query Conservation
Alig confidence																.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation																.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Sequence		R	S	D	W	R	K	F	F	S	E	F	Q	A	K	.	G	T	I	V	V	A	D	E	R	Q	A	D	R	A	M	L	V	F	D	P	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	S	K	K	R	Y	S	P	A	S	T	F	I	P	.	H	T	L	F	A	L	D	A	G	A	V	R
Template Known Secondary structure			G	G	G							T	T			.									S	S	S	S							S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T			B			G	G	G				.									T	S
Template Predicted Secondary structure																.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.																		.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80	.	.	.
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	S	V	L	N	T	I	P	Y	R	I	N	G	H	E	I	K	D	V	A	R	Y	S	E	L	T	L	T	G	V	L	Q	K	S	S	N	V	G	V	S	K	L	A	L	A	M	P	S	S	A	L	V	D	T	Y	S	R	F	G	L	G	K	A	T	N	L	G	L	V	G	E	R	S	G	L	Y	P	Q	K
Query Conservation
Alig confidence										.	.	.	.																																																					.	.	.							.	.	.	.	.	.	.
Template Conservation										.	.	.	.																																																					.	.	.							.	.	.	.	.	.	.
Template Sequence		D	E	F	Q	I	F	R	W	.	.	.	.	D	G	V	N	R	G	F	A	G	H	N	Q	D	Q	D	L	R	S	A	M	R	N	S	T	V	W	V	Y	E	L	F	A	K	E	I	G	D	D	K	A	R	R	Y	L	K	K	I	D	Y	G	N	A	.	.	.	D	P	S	T	G	D	.	.	.	.	.	.	.
Template Known Secondary structure		S	T	T			B			.	.	.	.		S				S		T	T	T	S	S		B								T	T																								T	T		T	T		.	.	.							.	.	.	.	.	.	.
Template Predicted Secondary structure										.	.	.	.																																																					.	.	.							.	.	.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.					.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.				.	.	.	.	.	150
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420		.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		Q	R	W	S	D	I	E	R	A	T	F	S	F	G	Y	G	.	L	M	V	T	P	L	Q	L	A	R	V	Y	A	T	I	G	S	Y	G	I	Y	R	P	L	S	I	T	K	V	D	P	P	V	P	G	E	R	V	F	P	E	S	I	V	R	T	V	V	H	M	M	E	S	V	A	L	P	G	G	G	G	V	K
Query Conservation																		.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.						.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	Y	W	I	E	G	S	L	A	I	S	A	Q	E	Q	I	A	F	L	R	K	L	Y	R	N	E	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	R	V	E	H	Q	R	L	V	K	D	L	M	I	V	E	A	G	R	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	T	T	T	T	S	S			B														T	T		S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S												T						T	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Template SS confidence
													153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.																		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		484	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	I	K	G	Y	R	I	A	I	K	T	G	T	A	K	K	V	G	P	D	G	R	Y	I	N	K	Y	I	A	Y	T	A	G	V	A	P	A	S	Q	P	R	F	A	L	V	V	V	I	N	D	P	Q	A	G	K	Y	Y	G	G	A	V	S	A	P	V	F	G	A	I	M	G	G	V	L	R	T	M	N	I
Query Conservation
Alig confidence		.	.	.	.														.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Template Conservation		.	.	.	.														.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Template Sequence		.	.	.	.	N	W	I	L	R	A	K	T	G	W	E	G	R	.	.	.	.	.	.	.	.	.	.	.	M	G	W	W	V	G	W	V	E	W	P	T	G	S	V	F	F	A	L	N	I	D	T	P	.	.	.	.	.	.	N	R	M	D	D	L	F	K	R	E	A	I	V	R	A	I	L	R	S	I	E	A
Template Known Secondary structure		.	.	.	.	T										S	S	S	.	.	.	.	.	.	.	.	.	.	.											T	T												T	.	.	.	.	.	.	T	G	G	G	G	T														T	T	S
Template Predicted Secondary structure		.	.	.	.														.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Template SS confidence
						199	200	.	.	.	.	.	.	.	.	.	210	.												.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.							.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		564	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	P
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		258	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions