Job Description P0AD68 Confidence 99.74% Date Thu Jan 5 11:20:08 GMT 2012 Rank 62 Aligned Residues 250 % Identity 14% Template c3p09B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:beta-lactamase; PDBTitle: crystal structure of beta-lactamase from francisella tularensis Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.				320
Predicted Secondary structure																																																																														.	.	.
Query SS confidence																																																																														.	.	.
Query Sequence		V	Y	R	E	L	N	N	A	V	A	F	N	K	A	E	S	G	S	A	V	L	V	D	V	N	T	G	E	V	L	A	M	A	N	S	P	S	Y	N	P	N	N	L	S	G	T	P	K	E	A	M	R	N	R	T	I	T	D	V	F	E	P	G	S	T	V	K	P	M	V	V	M	T	A	L	Q	.	.	.	R
Query Conservation																																																																														.	.	.
Alig confidence																			.												.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Template Conservation																			.												.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	D	D	S	F	K	N	L	E	N	K	Y	D	G	K	I	G	.	I	Y	T	L	N	T	D	N	I	K	Y	.	.	.	.	.	.	.	.	.	N	E	S	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	F	P	I	C	S	V	F	K	F	L	L	V	G	A	I	L	D	Y	D	X	H
Template Known Secondary structure															S				.												.	.	.	.	.	.	.	.	.	S	T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					G	G	G
Template Predicted Secondary structure																			.												.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.										.	50	.	.																	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.				.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.				.	.	360	.	.	.	.	.	.	.	.	.	370	.		.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure															.	.	.																									.	.	.															.
Query SS confidence															.	.	.																									.	.	.															.
Query Sequence		G	V	V	R	E	N	S	V	L	N	T	I	P	.	.	.	Y	R	I	N	G	H	E	I	K	D	V	A	R	Y	S	E	L	T	L	T	G	V	L	Q	.	.	.	K	S	S	N	V	G	V	S	K	L	A	L	A	M	.	P	S	S	A	L	V	D	T	Y	S	R	F	G	L	G	K	A	T	N	L	G	L
Query Conservation															.	.	.																									.	.	.															.
Alig confidence															.	.	.																									.	.	.															.															.
Template Conservation																																																																										.
Template Sequence		N	Q	G	F	L	D	K	K	I	P	I	N	Q	D	D	I	G	K	L	G	Y	A	P	I	T	A	K	N	V	G	K	T	L	T	I	S	Q	L	N	Y	A	A	I	L	S	D	S	P	A	S	N	I	L	V	R	E	L	G	G	L	Q	N	L	N	K	F	I	K	K	L	G	D	.	N	D	T	I	I	T	A
Template Known Secondary structure		S	T	T	G	G	G											T	T					T	T	T	G	G	G	T	T	S													T	T													T												T	T		.		S		B
Template Predicted Secondary structure																																																																										.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420		.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		V	G	E	R	S	G	L	Y	P	Q	K	Q	R	W	S	D	I	E	R	A	T	F	S	F	G	Y	G	.	L	M	V	T	P	L	Q	L	A	R	V	Y	A	T	I	G	S	Y	G	I	Y	R	P	L	S	I	T	K	V	D	P	P	V	P	G	E	R	V	F	P	E	S	I	V	R	T	V	V	H	M	M	E
Query Conservation																													.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.														.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	P	E	I	N	Y	T	Q	P	H	S	N	I	N	K	T	T	P	K	A	I	T	K	D	I	Y	K	L	A	F	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	I	L	D	K	K	H	K	D	I	F	I	K	Y	L	Q
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	G	G	G				T	T			T	T																	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.																			.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		473	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.		.	.	.	.	.	.	.	.	530	.	.	.	.	.		.	.	.	.	540	.	.	.	.	.	.	.	.	.	550
Predicted Secondary structure																																																			.															.
Query SS confidence																																																			.															.
Query Sequence		S	V	A	L	P	G	G	G	G	V	K	A	A	I	K	G	Y	R	I	A	I	K	T	G	T	A	K	K	V	G	P	D	G	R	Y	I	N	K	Y	I	A	Y	T	A	G	V	A	P	A	.	S	Q	P	R	F	A	L	V	V	V	I	N	D	P	.	Q	A	G	K	Y	Y	G	G	A	V	S	A	P	V	F
Query Conservation																																																			.															.
Alig confidence																												.	.	.	.	.	.	.	.	.															.															.
Template Conservation																												.	.	.	.	.	.	.	.	.
Template Sequence		D	N	N	T	G	A	N	R	I	A	F	S	X	P	K	D	W	I	I	G	D	K	T	G	T	C	.	.	.	.	.	.	.	.	.	G	Q	Y	A	A	T	N	D	V	A	I	I	W	P	K	N	Q	Q	P	I	A	L	G	I	L	Y	T	N	P	N	D	K	N	A	P	S	N	E	E	I	I	Q	Q	A	A
Template Known Secondary structure					S		T	T	T	G	G	G	G	S		T	T	S										.	.	.	.	.	.	.	.	.	S	S	T	T											T	T	S												T	T		T	T
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230										.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		551	.	.	.	.	.	.	.	.	560	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	I	M	G	G	V	L	R	T	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L	I	A	N	D	L	T	N	T	Y
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions