Job Description P0AD68 Confidence 98.84% Date Thu Jan 5 11:20:08 GMT 2012 Rank 73 Aligned Residues 203 % Identity 17% Template c3mfdB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:d-alanyl-d-alanine carboxypeptidase dacb; PDBTitle: the structure of the beta-lactamase superfamily domain of d-alanyl-d-2 alanine carboxypeptidase from bacillus subtilis Resolution 1.75 Å

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		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	V	L	V	D	V	N	T	G	E	V	L	A	M	A	N	S	P	S	Y	N	P	N	N	L	S	G	T	P	K	E	A	M	R	N	R	T	I	T	D	V	F	E	P	G	S	T	V	K	P	M	V	V	M	T	A	L	Q	R	G	V	V	R	E	N	S	V	L	N	T	I	P	Y	R	I	N	G	H	E
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	A	I	I	I	D	G	A	S	G	R	V	L	Y	A	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	H	Q	K	R	R	I	A	S	I	T	K	I	X	T	A	V	L	A	I	E	S	G	K	X	D	Q	T	V	T	V	S	A	N	A	V	R	T	E	G	S	A
Template Known Secondary structure								T	T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	T			B			G	G	G	G											T	T		T	T	S										T			S	S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50																						.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		341	.	.	.	.	.	.	.	.	350	.	.	.	.					.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.							.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure																.	.	.	.																			.	.	.	.	.	.
Query SS confidence																.	.	.	.																			.	.	.	.	.	.
Query Sequence		I	K	D	V	A	R	Y	S	E	L	T	L	T	G	.	.	.	.	V	L	Q	K	S	S	N	V	G	V	S	K	L	A	L	A	M	P	.	.	.	.	.	.	S	S	A	L	V	D	T	Y	S	R	F	G	L	G	K	A	T	N	L	G	L	V	G	E	R	S	G	L	Y	P	Q	K	Q	R	W	S	D	I
Query Conservation																.	.	.	.																			.	.	.	.	.	.
Alig confidence									.							.	.	.	.																			.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	Y	L	T	E	G	Q	.	K	V	K	L	K	D	L	V	Y	G	L	X	L	R	S	G	N	D	A	A	V	A	I	A	E	H	V	G	G	S	L	D	G	F	V	Y	X	X	N	Q	K	A	E	Q	L	G	X	K	N	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	F	Q
Template Known Secondary structure						T	T		.																													S	S																T		T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B		S
Template Predicted Secondary structure									.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		94	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150																				.	.	.
		411	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	A	T	F	S	F	G	Y	G	L	M	V	T	P	L	Q	L	A	R	V	Y	A	T	I	G	S	Y	G	I	Y	R	P	L	S	I	T	K	V	D	P	P	V	P	G	E	R	V	F	P	E	S	I	V	R	T	V	V	H	M	M	E	S	V	A	L	P	G	G	G	G	V	K	A	A	I	K	G	Y	R
Query Conservation
Alig confidence																														.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	P	H	G	L	D	D	H	E	N	H	Y	S	T	A	Y	D	X	A	I	L	T	K	Y	A	X	K	L	.	.	.	.	.	K	D	Y	Q	K	I	S	G	T	K	I	Y	K	A	E	T	X	E	S	V	W	K	N	K	N	K	L	L	T	X	L	Y	P	Y	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Known Secondary structure		S	S	S			S		S	S	S		B	B													T	T	S	.	.	.	.	.								T		S					S	S	S	S						S						T	T		T	T	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																														.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.						.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.													.
		491	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	I	K	T	G	T	A	K	K	V	G	P	D	G	R	Y	I	N	K	Y	I	A	Y	T	A	G	V	A	P	A	S	Q	P	R	F	A	L	V	V	V
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.
Template Sequence		T	G	G	K	T	G	Y	T	K	L	A	K	.	.	.	.	.	.	.	.	.	.	R	T	L	V	S	T	A	S	K	D	G	I	D	L	I	A	V	T	I
Template Known Secondary structure										T	T	T		.	.	.	.	.	.	.	.	.	.										T	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.											.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions