Job Description P0AD68 Confidence 99.92% Date Thu Jan 5 11:20:08 GMT 2012 Rank 47 Aligned Residues 249 % Identity 15% Template c3lezA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:beta-lactamase; PDBTitle: crystal structure of a halotolerant bacterial beta-lactamase Resolution 1.25 Å

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		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.		.
Predicted Secondary structure																																																																																.
Query SS confidence																																																																																.
Query Sequence		R	E	L	N	N	A	V	A	F	N	K	A	E	S	G	S	A	V	L	V	D	V	N	T	G	E	V	L	A	M	A	N	S	P	S	Y	N	P	N	N	L	S	G	T	P	K	E	A	M	R	N	R	T	I	T	D	V	F	E	P	G	S	T	V	K	P	M	V	V	M	T	A	L	Q	R	G	V	V	.	R
Query Conservation																																																																																.
Alig confidence																	.														.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Conservation																	.														.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	D	L	K	K	L	E	E	E	F	D	V	R	L	G	.	V	Y	A	I	D	T	G	A	D	K	E	I	S	.	.	.	.	.	.	Y	R	E	N	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	F	A	Y	T	S	T	F	K	P	L	A	V	G	A	V	L	Q	T	K	S	D	E	E
Template Known Secondary structure												T					.						T	T	T	T					.	.	.	.	.	.		S	T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					G	G	G	G
Template Predicted Secondary structure																	.														.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.							.	.	.	.	.																	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.						350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.		.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.																								.
Query SS confidence																											.	.	.	.	.																								.
Query Sequence		E	N	S	V	L	N	T	I	P	Y	R	I	N	G	H	E	I	K	D	V	A	R	Y	S	E	.	.	.	.	.	L	T	L	T	G	V	L	Q	K	S	S	N	V	G	V	S	K	L	A	L	A	M	P	.	S	S	A	L	V	D	T	Y	S	R	F	G	L	G	K	A	T	N	L	G	L	V	G	E	R	S
Query Conservation																											.	.	.	.	.																								.
Alig confidence																											.	.	.	.	.																								.																	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Template Sequence		L	E	E	T	I	T	Y	S	E	E	D	L	V	T	Y	S	P	I	T	E	Q	H	V	D	E	G	M	T	L	V	E	I	A	D	A	A	I	R	Y	S	D	N	T	A	G	N	L	L	L	E	A	M	G	G	P	D	E	L	E	T	I	L	R	D	I	G	D	E	T	I	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				S						G	G	G			S	S		T	T	G	G	G		T	T	T																											T	T	S											T	T			S		.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	Y	P	Q	K	Q	R	W	S	D	I	E	R	A	T	F	S	F	G	Y	G	L	M	V	T	P	L	Q	L	A	R	V	Y	A	T	I	G	S	Y	G	I	Y	R	P	L	S	I	T	K	V	D	P	P	V	P	G	E	R	V	F	P	E	S	I	V	R	T	V	V	H	M	M	E	S	V	A	L	P	G
Query Conservation
Alig confidence		.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	E	M	D	R	Y	E	T	E	L	N	E	A	K	P	G	D	I	R	D	T	S	T	A	K	A	M	A	T	T	L	Q	Q	Y	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	D	V	L	D	A	D	R	R	E	V	L	T	N	M	L	I	N	N	T	T	G	D
Template Known Secondary structure		.	.	.	.	B					T	T	G	G	G				T	T			T	T																T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S	S														T		S	S		T
Template Predicted Secondary structure		.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
						174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.																			.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		479	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	G	V	K	A	A	I	K	G	Y	R	I	A	I	K	T	G	T	A	K	K	V	G	P	D	G	R	Y	I	N	K	Y	I	A	Y	T	A	G	V	A	P	A	S	Q	P	R	F	A	L	V	V	V	I	N	D	P	Q	A	G	K	Y	Y	G	G	A	V	S	A	P	V	F	G	A	I	M	G	G	V
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.
Template Sequence		A	L	I	R	A	G	V	P	D	G	W	T	V	G	D	K	T	G	A	G	G	.	.	.	.	.	.	.	.	Y	G	T	R	N	D	I	G	I	I	W	P	E	G	D	E	E	P	I	V	I	A	I	M	S	S	R	D	E	E	D	A	D	Y	D	D	K	L	I	E	K	A	T	E	I	V	L	Q	E	L
Template Known Secondary structure		T	T	G	G	G	G	S		T	T											T	.	.	.	.	.	.	.	.	T	T											T	T	T													S	S	T	T					T
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.									.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions