Job Description P0AD68 Confidence 100.00% Date Thu Jan 5 11:20:08 GMT 2012 Rank 29 Aligned Residues 231 % Identity 19% Template c3if6C_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:oxa-46 oxacillinase; PDBTitle: crystal structure of oxa-46 beta-lactamase from p.2 aeruginosa Resolution 2.40 Å

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		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	I	D	E	R	L	Q	A	L	V	Y	R	E	L	N	N	A	V	A	F	N	K	A	E	S	G	S	A	V	L	V	D	V	N	T	G	E	V	L	A	M	A	N	S	P	S	Y	N	P	N	N	L	S	G	T	P	K	E	A	M	R	N	R	T	I	T	D	V	F	E	P	G	S	T	V	K	P	M	V
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	V	I	R	S	D	W	K	K	F	F	S	D	.	.	.	.	.	.	.	.	.	L	Q	A	E	G	A	I	V	I	A	D	E	R	Q	A	K	H	T	L	S	V	F	D	Q	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	A	K	R	Y	S	P	A	S	T	F	I	P	H	T
Template Known Secondary structure						G	G	G						T	.	.	.	.	.	.	.	.	.	T	T											S	S	S	S							S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S		B			G	G	G
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.										.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.																		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	M	T	A	L	Q	R	G	V	V	R	E	N	S	V	L	N	T	I	P	Y	R	I	N	G	H	E	I	K	D	V	A	R	Y	S	E	L	T	L	T	G	V	L	Q	K	S	S	N	V	G	V	S	K	L	A	L	A	M	P	S	S	A	L	V	D	T	Y	S	R	F	G	L	G	K	A	T	N	L	G	L
Query Conservation
Alig confidence																												.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.
Template Sequence		L	F	A	L	D	A	D	A	V	R	D	E	F	Q	V	F	R	W	V	N	R	S	F	A	G	H	.	.	.	.	.	.	.	N	Q	D	Q	D	L	R	S	A	M	R	N	S	T	V	W	V	Y	E	L	F	A	K	D	I	G	E	D	K	A	R	R	Y	L	K	Q	I	D	Y	G	N	D	Y	W	I	D	G
Template Known Secondary structure								T	S			S	S	S			B						S	S	T	T	T	.	.	.	.	.	.	.	S	S		B									T																								T	T					T	T	T	T	S
Template Predicted Secondary structure																												.	.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.								.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	E	R	S	G	L	Y	P	Q	K	Q	R	W	S	D	I	E	R	A	T	F	S	F	G	Y	G	L	M	V	T	P	L	Q	L	A	R	V	Y	A	T	I	G	S	Y	G	I	Y	R	P	L	S	I	T	K	V	D	P	P	V	P	G	E	R	V	F	P	E	S	I	V	R	T	V	V	H	M	M	E	S
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	L	K	I	S	A	H	E	Q	I	L	F	L	R	K	L	Y	R	N	Q	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	K	V	E	H	Q	R	L	V	K	D	L	M	I	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S			B														T	T		S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S												T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																												163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.																		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		474	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	L	P	G	G	G	G	V	K	A	A	I	K	G	Y	R	I	A	I	K	T	G	T	A	K	K	V	G	P	D	G	R	Y	I	N	K	Y	I	A	Y	T	A	G	V	A	P	A	S	Q	P	R	F	A	L	V	V	V	I	N	D	P	Q	A	G	K	Y	Y	G	G	A	V	S	A	P	V	F	G	A	I
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Template Sequence		E	A	G	R	.	.	.	.	.	.	.	.	.	.	S	W	I	L	R	A	K	T	G	W	E	G	R	.	.	.	.	.	.	.	.	.	.	.	F	G	W	W	V	G	W	I	E	W	P	T	G	P	V	F	F	A	L	N	I	D	T	P	.	.	.	.	.	.	N	R	T	D	D	L	F	K	R	E	A	I
Template Known Secondary structure					S	.	.	.	.	.	.	.	.	.	.	S											S	S	.	.	.	.	.	.	.	.	.	.	.											T	T												T	.	.	.	.	.	.	T	G	G	G	S	T	T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Template SS confidence
		200	.	.	.											.	.	.	.	.	.	210	.	.	.	.	.	.												.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240							.	.	.	.	.	.	.	.	.	250	.	.
		554	.	.	.	.	.	560	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	G	G	V	L	R	T	M	N	I	E	P	D	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	R	A	I	L	R	S	I	D	A	L	P	P	N
Template Known Secondary structure									T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions