Job Description P0AD68 Confidence 99.97% Date Thu Jan 5 11:20:08 GMT 2012 Rank 36 Aligned Residues 366 % Identity 12% Template c2xftA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:orf12; PDBTitle: structural and mechanistic studies on a cephalosporin esterase from2 the clavulanic acid biosynthesis pathway Resolution 1.80 Å

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		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.								.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.
Query Sequence		P	S	G	E	V	T	A	H	L	I	G	F	T	N	V	D	S	Q	G	I	E	G	V	E	K	.	.	.	.	.	.	.	S	F	D	K	W	L	T	G	Q	P	G	E	R	I	V	R	K	D	R	Y	G	R	V	I	E	D	I	S	S	T	D	S	Q	A	A	H	N	L	A	L	S	I	D	E	R	L	Q	A
Query Conservation																											.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	M	G	D	A	A	R	W	A	M	G	L	L	T	S	S	R	P	E	D	V	A	A	R	F	I	P	T	F	N	F	A	E	T	V	R	E	W	R	S	K	G	P	F	T	V	R	A	Y	H	P	V	A	H	K	G	W	V	V	L	S	A	P	A	G	V	R	Y	I	L	S	L	T	L	D	S	S	G	L	I
Template Known Secondary structure																								T	T	B		T	T													T												T	T									G	G	G											T	T	S
Template Predicted Secondary structure
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.					.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.																																		.
Query SS confidence																																												.	.	.	.																																		.
Query Sequence		L	V	Y	R	E	L	N	N	A	V	A	F	N	K	A	E	S	G	S	A	V	L	V	D	V	N	T	G	E	V	L	A	M	A	N	S	P	S	Y	N	P	N	.	.	.	.	N	L	S	G	T	P	K	E	A	M	R	N	R	T	I	T	D	V	F	E	P	G	S	T	V	K	P	M	V	V	M	T	A	.
Query Conservation																																												.	.	.	.																																		.
Alig confidence								.	.	.	.	.	.	.	.	.	.																											.	.	.	.																																		.
Template Conservation								.	.	.	.	.	.	.	.	.	.
Template Sequence		R	I	L	T	L	K	.	.	.	.	.	.	.	.	.	.	P	E	T	V	I	P	D	M	V	T	W	N	D	V	E	E	T	L	H	T	P	G	V	Q	H	S	V	Y	A	V	R	L	T	P	D	G	H	E	V	L	H	A	S	A	P	E	R	P	M	P	T	G	A	A	Y	K	L	Y	L	M	R	A	L	V
Template Known Secondary structure								.	.	.	.	.	.	.	.	.	.									S	S											T	T												T	T									S	T	T	S					G	G	G
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		115	.	.	.	.	120											.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
				318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.			.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.					.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.																	.	.																									.	.	.	.
Query SS confidence		.	.																	.	.																									.	.	.	.
Query Sequence		.	.	L	Q	R	G	V	V	R	E	N	S	V	L	N	T	I	P	.	.	Y	R	I	N	G	H	E	I	K	D	V	A	R	Y	S	E	L	T	L	T	G	V	L	Q	.	.	.	.	K	S	S	N	V	G	V	S	K	L	A	L	A	M	P	S	S	A	L	V	D	T	Y	S	R	F	G	L	G	K	A	T
Query Conservation		.	.																	.	.																									.	.	.	.
Alig confidence		.	.																	.	.																									.	.	.	.																														.
Template Conservation																																																																															.
Template Sequence		A	E	I	E	K	G	T	V	G	W	D	E	I	L	T	L	T	P	E	L	R	S	L	P	T	G	D	M	Q	D	L	P	D	G	T	R	V	T	V	R	E	T	A	H	K	M	I	A	L	S	D	N	T	G	A	D	L	V	A	D	R	L	G	R	E	V	V	E	R	S	L	A	A	A	G	H	H	.	D	P
Template Known Secondary structure							T	S	S		T	T							G	G	G				S	S	S	S	G	G	G	S		T	T															T																										T		S	.		G
Template Predicted Secondary structure																																																																															.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.		.	.
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	G	L	V	G	E	R	S	G	L	Y	P	Q	K	Q	R	W	S	D	I	E	R	A	T	F	S	F	G	Y	G	L	M	V	T	P	L	Q	L	A	R	V	Y	A	T	I	G	S	Y	G	I	Y	R	P	L	S	I	T	K	V	D	P	P	V	P	G	E	R	V	F	P	E	S	I	V	R	T	V	V	H
Query Conservation
Alig confidence																															.	.	.	.	.
Template Conservation																															.	.	.	.	.
Template Sequence		S	L	M	R	P	F	L	T	S	H	E	V	F	E	L	G	W	G	D	P	E	R	R	A	E	W	V	R	Q	.	.	.	.	.	D	E	A	G	R	R	E	L	L	E	K	M	A	G	V	M	T	V	R	G	S	D	L	G	A	T	V	H	Q	L	G	I	D	W	H	M	D	A	F	D	V	V	R	V	L	E
Template Known Secondary structure		G	G	G		S													S												.	.	.	.	.														S	S					G	G	G			S			G	G	G	T		S
Template Predicted Secondary structure																															.	.	.	.	.
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.						.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
		470	.													.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	M	.	.	.	.	.	.	.	.	.	.	.	.	E	S	V	A	L	P	G	G	G	G	V	K	A	A	I	K	G	Y	R	I	A	I	K	T	G	T	A	K	K	V	G	P	D	G	R	Y	I	N	K	Y	I	A	Y	T	A	G	V	A	P	A	S	Q	P	R	F	A	L	V	V	V	I	N	D	P	Q	A
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.																		.
Template Conservation																																											.	.	.	.	.	.	.	.	.																		.
Template Sequence		G	L	L	Q	D	S	G	R	D	T	S	G	T	V	E	E	I	L	T	A	Y	P	G	L	L	I	D	E	E	R	W	R	R	V	Y	F	K	A	G	S	S	.	.	.	.	.	.	.	.	.	P	G	V	M	M	F	C	W	L	L	Q	D	H	A	G	I	S	.	Y	V	L	V	L	R	Q	S	A	D	E	Q
Template Known Secondary structure											T	T	S								S			S	S				T	T	T												.	.	.	.	.	.	.	.	.	T	T											T	T	S			.										S	S	G
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.																		.
Template SS confidence
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.										380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.		.	.	.	400	.	.	.	.	.	.	.	.
		538	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	Y	Y	G	G	A	V	S	A	P	V	F	G	A	I	M	G	G	V	L	R	T	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	L	I	G	D	G	L	F	L	R	G	I	G	A	K	I	I	E	A	E	A	K	L	L
Template Known Secondary structure		G	G	T	T	T	S													T					T
Template Predicted Secondary structure
Template SS confidence
		409	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions