Job Description P0AD68 Confidence 97.20% Date Thu Jan 5 11:20:08 GMT 2012 Rank 95 Aligned Residues 265 % Identity 17% Template c2qz6A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:beta-lactamase; PDBTitle: first crystal structure of a psychrophile class c beta-2 lactamase Resolution 2.26 Å

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		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	Q	A	L	V	Y	R	E	L	N	N	A	V	A	F	N	K	A	E	S	G	S	A	V	L	V	D	V	N	T	G	E	V	L	A	M	A	N	S	P	S	Y	N	P	N	N	L	S	G	T	P	K	E	A	M	R	N	R	T	I	T	D	V	F	E	P	G	S	T	V	K	P	M	V	V	M	T	A	L
Query Conservation
Alig confidence																															.	.						.															.	.	.	.	.	.	.	.
Template Conservation																															.	.						.															.	.	.	.	.	.	.	.
Template Sequence		D	I	R	Q	V	V	D	S	T	V	E	P	L	M	Q	Q	Q	D	I	A	G	L	S	V	A	V	I	Q	N	.	.	G	K	A	Q	Y	.	F	N	Y	G	V	A	N	K	D	S	K	Q	P	I	.	.	.	.	.	.	.	.	T	E	N	T	L	F	E	I	G	S	V	S	K	T	F	T	A	T	L	A	G
Template Known Secondary structure																		T	T		S									T	.	.	T					.					B	S		T	T	T			B		.	.	.	.	.	.	.	.		T	T		B				G	G	G
Template Predicted Secondary structure																															.	.						.															.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.			.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.									.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
					319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.																																	.	.	360	.	.	.
Predicted Secondary structure		.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	Q	R	G	V	V	R	E	N	S	V	L	N	T	I	P	Y	R	I	N	G	H	E	I	K	D	V	A	R	Y	S	E	L	T	L	T	G	V	L	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	S	S	N	V	G
Query Conservation		.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.																					.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.
Template Sequence		Y	A	L	A	N	G	K	L	K	L	S	D	P	A	S	Q	Y	L	P	A	L	R	G	.	.	.	.	.	.	D	K	F	D	H	I	S	L	L	N	L	G	T	Y	T	A	G	G	L	P	L	Q	F	P	T	G	K	M	I	S	Y	Y	Q	H	W	K	P	A	F	A	P	G	T	Q	R	L	Y	S	N	P	S
Template Known Secondary structure						T	T	S			T	T	S	B	G	G	G	G		G	G	G	T	T	.	.	.	.	.	.	S	G	G	G	S	S	B						T	T		S	S				S	S																S	S		T	T	T
Template Predicted Secondary structure																									.	.	.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.							.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		364	.	.	.	.				.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.											.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430
Predicted Secondary structure							.	.	.																										.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.																										.	.	.	.	.	.	.	.	.	.
Query Sequence		V	S	K	L	A	.	.	.	L	A	M	P	S	S	A	L	V	D	T	Y	S	R	F	G	L	G	K	A	T	N	L	G	L	.	.	.	.	.	.	.	.	.	.	V	G	E	R	S	G	L	Y	P	Q	K	Q	R	W	S	D	I	E	R	A	T	F	S	F	G	Y	G	L	M	V	T	P	L	Q	L	A	R
Query Conservation							.	.	.																										.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.																.										.	.	.	.	.	.	.	.	.	.
Template Conservation																									.
Template Sequence		I	G	L	F	G	H	L	A	A	Q	S	L	G	Q	P	F	E	K	L	M	E	Q	T	.	V	L	P	K	L	G	L	K	H	T	F	I	S	V	P	E	T	Q	M	S	L	Y	A	Q	G	Y	D	K	A	G	K	P	V	R	V	S	P	G	A	L	D	A	E	A	Y	G	I	K	T	S	T	S	D	L	I	H
Template Known Secondary structure												T	T	T	S									T	.	T	T	G	G	G	T		S	S			S	S			G	G	G	G	G	G	B				B		T	T	S		B							T	T					T
Template Predicted Secondary structure																									.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		431	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	Y	A	T	I	G	S	Y	G	I	Y	R	P	L	S	I	T	K	V	D	P	P	V	P	G	E	R	V	F	P	E	S	I	V	R	T	V	V	H	M	M	E	S	V	A	L	P	G	G	G	G	V	K	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	V	E	V	N	M	H	P	A	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	K	P	L	Q	Q	A	I	A	A	T	H	T	G	Y	Y	T	V	D	G	M	T	Q	G	L	G	W	E	M	Y	P	Y	P	I	K	V	D	A	L	V	E	G	N	S	T	Q	M	A	M	E	P
Template Known Secondary structure									G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S												T	S						T	T					S	S						S	S										T		S					S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		234	.	.	.	.	.	240	.	.	.																			.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
												485	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	A	I	K	G	Y	R	I	A	I	K	T	G	T	A	K	K	V	G	P	D	G	R	Y	I	N	K	Y	I	A	Y	T	A	G	V	A	P	A	S	Q	P	R	F	A	L	V	V	V	I	N	D	P	Q	A	G	K	Y	Y	G	G	A	V	S	A	P	V	F	G	A	I	M
Query Conservation		.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.												.	.															.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.												.	.															.	.	.	.	.
Template Sequence		H	K	V	N	W	L	T	P	P	Q	A	A	P	L	D	T	L	V	N	K	T	G	S	T	.	.	.	.	.	.	.	.	.	.	.	G	G	F	G	A	Y	V	A	Y	V	P	.	.	S	K	G	L	G	V	V	I	L	A	N	K	N	Y	.	.	.	.	.	P	N	A	E	R	V	K	A	A	H	A	I	L
Template Known Secondary structure															S	S										.	.	.	.	.	.	.	.	.	.	.	S	S									T	.	.	T	T	T								S	B			.	.	.	.	.
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.												.	.															.	.	.	.	.
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.												320	.	.	.	.	.	.	.	.	.	330			.	.	.	.	.	.	.	.	.	340	.	.	.	.						.	.	.	.	.	350	.	.	.	.	.	.	.
		555	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	A	M
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		358	.	360

No model constructed - rank, confidence too low

---

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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