Job Description P0AD68 Confidence 99.90% Date Thu Jan 5 11:20:08 GMT 2012 Rank 51 Aligned Residues 244 % Identity 17% Template c2j7vA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:tll2115 protein; PDBTitle: structure of pbp-a Resolution 1.90 Å

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		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		A	L	V	Y	R	E	L	N	N	A	V	A	F	N	K	A	E	S	G	S	A	V	L	V	D	V	N	T	G	E	V	L	A	M	A	N	S	P	S	Y	N	P	N	N	L	S	G	T	P	K	E	A	M	R	N	R	T	I	T	D	V	F	E	P	G	S	T	V	K	P	M	V	V	M	T	A	L	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	N	L	Q	Q	Q	I	Q	Q	L	V	S	R	Q	P	N	L	T	A	G	L	Y	F	F	N	L	D	S	G	A	S	L	N	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	D	Q	V	F	P	A	A	S	T	I	K	F	P	I	L	V	A	F	F	K	A	V
Template Known Secondary structure														S	S	T	T										T	T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B	T	T	S					G	G	G	G
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.																							.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.			.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.					.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.		.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure																	.	.																						.	.	.	.																			.
Query SS confidence																	.	.																						.	.	.	.																			.
Query Sequence		Q	R	G	V	V	R	E	N	S	V	L	N	T	I	P	.	.	Y	R	I	N	G	H	E	I	K	D	V	A	R	Y	S	E	L	T	L	T	G	.	.	.	.	V	L	Q	K	S	S	N	V	G	V	S	K	L	A	L	A	M	P	.	S	S	A	L	V	D	T	Y	S	R	F	G	L	G	K	A	T	N	L
Query Conservation																	.	.																						.	.	.	.																			.
Alig confidence																	.	.																						.	.	.	.																			.																.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		D	E	G	R	V	T	L	Q	E	R	L	T	M	R	P	D	L	I	A	P	E	A	G	T	L	Q	Y	Q	K	P	N	S	Q	Y	A	A	L	E	V	A	E	L	M	I	T	I	S	D	N	T	A	T	N	M	I	I	D	R	L	G	G	A	A	E	L	N	Q	Q	F	Q	E	W	G	L	E	N	.	.	.	.
Template Known Secondary structure			T	T	S	S		S	S	S						T	T	T				S	S		S	G	G	G	S		T	T															S													T	T												T	T		T	T	.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	V	G	E	R	S	G	L	Y	P	Q	K	Q	R	W	S	D	I	E	R	A	T	F	S	F	G	Y	G	L	M	V	T	P	L	Q	L	A	R	V	Y	A	T	I	G	S	Y	G	I	Y	R	P	L	S	I	T	K	V	D	P	P	V	P	G	E	R	V	F	P	E	S	I	V	R	T	V	V	H	M	M
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	I	N	N	P	L	P	D	M	K	G	T	N	T	T	S	P	R	D	L	A	T	L	M	L	K	I	G	Q	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	I	L	S	P	R	S	R	D	R	L	L	D	I	M
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		B			S		T	T		T	T																			T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.																			.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		472	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	V	A	L	P	G	G	G	G	V	K	A	A	I	K	G	Y	R	I	A	I	K	T	G	T	A	K	K	V	G	P	D	G	R	Y	I	N	K	Y	I	A	Y	T	A	G	V	A	P	A	S	Q	P	R	F	A	L	V	V	V	I	N	D	P	Q	A	G	K	Y	Y	G	G	A	V	S	A	P	V	F	G
Query Conservation
Alig confidence								.																					.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.
Template Conservation								.																					.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.
Template Sequence		R	R	T	V	T	N	.	T	L	L	P	A	G	L	G	K	G	A	T	I	A	H	K	T	G	D	I	.	.	.	.	.	.	.	.	.	.	G	I	V	V	G	D	A	G	M	V	D	M	P	N	G	Q	R	Y	V	A	A	M	M	V	K	R	P	Y	.	.	.	.	.	N	D	P	R	G	S	E	L	I	R
Template Known Secondary structure		T	S		S			.	S	S	G	G	G	G	S		T	T											.	.	.	.	.	.	.	.	.	.	S	S											T	T	S												S	T	.	.	.	.	.	T
Template Predicted Secondary structure								.																					.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.
Template SS confidence
		198	.	200	.	.	.		.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.											.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.						.	.	.	.	.	.	.	.	260	.
		552	.	.	.	.	.	.	.	560	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	M	G	G	V	L	R	T	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	V	S	R	M	V	Y	Q	A	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		262	.	.	.	.	.	.	.	270	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions