Job Description P0AD68 Confidence 97.92% Date Thu Jan 5 11:20:08 GMT 2012 Rank 88 Aligned Residues 284 % Identity 15% Template c1zkjA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:extended-spectrum beta-lactamase; PDBTitle: structural basis for the extended substrate spectrum of cmy-2 10, a plasmid-encoded class c beta-lactamase Resolution 1.55 Å

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		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		L	Q	A	L	V	Y	R	E	L	N	N	A	V	A	F	N	K	A	E	S	G	S	A	V	L	V	D	V	N	T	G	E	V	L	A	M	A	N	S	P	S	Y	N	P	N	N	L	S	G	T	P	K	E	A	M	R	N	R	T	I	T	D	V	F	E	P	G	S	T	V	K	P	M	V	V	M	T	A	L	.
Query Conservation																																																																																	.
Alig confidence																													.	.									.	.	.	.	.	.	.	.	.																																		.
Template Conservation																													.	.									.	.	.	.	.	.	.	.	.
Template Sequence		L	R	P	V	V	D	A	S	I	Q	P	L	L	K	E	H	R	I	P	G	M	A	V	A	V	L	K	.	.	D	G	K	A	H	Y	F	N	.	.	.	.	.	.	.	.	.	Y	G	V	A	N	R	E	S	G	A	G	V	S	E	Q	T	L	F	E	I	G	S	V	S	K	T	L	T	A	T	L	G	A	Y
Template Known Secondary structure		T															T	T		S									.	.	T	T							.	.	.	.	.	.	.	.	.			B	S		T	T	T			B			T	T		B				G	G	G
Template Predicted Secondary structure																													.	.									.	.	.	.	.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.			.	.	.	.	40	.	.	.										.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
				319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure		.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	Q	R	G	V	V	R	E	N	S	V	L	N	T	I	P	Y	R	I	N	G	H	E	I	K	D	V	A	R	Y	S	E	L	T	L	T	G	V	L	Q	K	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																					.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.
Template Sequence		A	V	V	K	G	A	M	Q	L	D	D	K	A	S	R	H	A	P	W	L	K	G	.	.	.	.	.	.	S	A	F	D	S	I	T	M	G	E	L	A	T	Y	S	A	G	G	L	P	L	Q	F	P	E	E	V	D	S	S	E	K	M	R	A	Y	Y	R	Q	W	A	P	V	Y	S	P	G	S	H	R	Q	Y
Template Known Secondary structure					T	T	S			T	T	S	B	G	G	G	G		G	G	G	T	T	.	.	.	.	.	.	S	G	G	G	S	S	B						T	T		S	S				S	S			T	T			S														S	S		T	T	T
Template Predicted Secondary structure																								.	.	.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.							100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
			361	.	.	.	.	.	.	.				.	370	.	.	.	.	.	.	.	.	.	380	.	.						.	.	.	.	.					.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.
Predicted Secondary structure		.									.	.	.															.	.	.	.	.						.	.	.	.
Query SS confidence		.									.	.	.															.	.	.	.	.						.	.	.	.
Query Sequence		.	N	V	G	V	S	K	L	A	.	.	.	L	A	M	P	S	S	A	L	V	D	T	Y	S	R	.	.	.	.	.	F	G	L	G	K	.	.	.	.	A	T	N	L	G	L	V	G	E	R	S	G	L	Y	P	Q	K	Q	R	W	S	D	I	E	R	A	T	F	S	F	G	Y	G	L	M	V	T	P	L	Q
Query Conservation		.									.	.	.															.	.	.	.	.						.	.	.	.
Alig confidence		.									.	.	.															.	.	.	.	.						.	.	.	.
Template Conservation
Template Sequence		S	N	P	S	I	G	L	F	G	H	L	A	A	S	S	L	K	Q	P	F	A	P	L	M	E	Q	T	L	L	P	G	L	G	M	H	H	T	Y	V	N	V	P	K	Q	A	M	A	S	Y	A	Y	G	Y	S	K	E	D	K	P	I	R	V	N	P	G	M	L	A	D	E	A	Y	G	I	K	T	S	S	A	D
Template Known Secondary structure																	T	T	S									T					T	T		S	S		B	S	S			G	G	G	G	G	G	B						T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		428	.	430	.	.	.	.	.	.	.	.	.	440												.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	R	V	Y	A	T	I	G	S	Y	G	I	.	.	.	.	.	.	.	.	.	.	.	Y	R	P	L	S	I	T	K	V	D	P	P	V	P	G	E	R	V	F	P	E	S	I	V	R	T	V	V	H	M	M	E	S	V	A	L	P	G	G	G	G	V	K	A	A	I	K	G	Y	R	I	A	I	K	T	G
Query Conservation															.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	L	R	F	V	K	A	N	I	G	G	V	D	D	K	A	L	Q	Q	A	I	S	L	T	H	Q	G	H	Y	S	V	G	G	M	T	Q	G	L	G	W	E	S	Y	A	Y	P	V	T	E	Q	T	L	L	A	G	N	S	A	K	V	I	L	E	A	N	P	T	A	A	P	R	E	Q	V	L	F	N	K	T	G
Template Known Secondary structure									T	T	T			S											T	T	S						T	T					S	S						S	S										T	S						S					B
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		497	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	K	K	V	G	P	D	G	R	Y	I	N	K	Y	I	A	Y	T	A	G	V	A	P	A	S	Q	P	R	F	A	L	V	V	V	I	N	D	P	Q	A	G	K	Y	Y	G	G	A	V	S	A	P	V	F	G	A	I	M	G	G	V	L
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.															.	.	.											.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.															.	.	.											.	.	.	.
Template Sequence		S	T	.	.	.	.	.	.	.	.	.	.	.	N	G	F	G	A	Y	V	A	F	V	P	A	R	G	.	.	.	I	G	I	V	M	L	A	N	R	N	.	.	.	.	Y	P	I	E	A	R	I	K	A	A	H	A	I	L	A	Q	L	A
Template Known Secondary structure				.	.	.	.	.	.	.	.	.	.	.	T	T									G	G	G	T	.	.	.								S	B		.	.	.	.
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.															.	.	.											.	.	.	.
Template SS confidence
		315	.												.	.	.	320	.	.	.	.	.	.	.	.	.	330				.	.	.	.	.	.	.	.	.	340					.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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