Job Description P0AD68 Confidence 98.91% Date Thu Jan 5 11:20:08 GMT 2012 Rank 71 Aligned Residues 205 % Identity 20% Template c1z6fA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:penicillin-binding protein 5; PDBTitle: crystal structure of penicillin-binding protein 5 from e. coli in2 complex with a boronic acid inhibitor Resolution 1.60 Å

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		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.				.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.
Query SS confidence																																																																		.	.	.
Query Sequence		A	F	N	K	A	E	S	G	S	A	V	L	V	D	V	N	T	G	E	V	L	A	M	A	N	S	P	S	Y	N	P	N	N	L	S	G	T	P	K	E	A	M	R	N	R	T	I	T	D	V	F	E	P	G	S	T	V	K	P	M	V	V	M	T	.	.	.	A	L	Q	R	G	V	V	R	E	N	S	V	L
Query Conservation																																																																		.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	V	P	Q	I	D	A	E	S	Y	I	L	I	D	Y	N	S	G	K	V	L	A	E	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	A	D	V	R	R	D	P	A	S	L	T	K	M	M	T	S	Y	V	I	G	Q	A	M	K	A	G	K	F	K	E	T	D	L	V
Template Known Secondary structure							S									T	T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	T			B			G	G	G															T	T	S			T	T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.																						.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		330	.	.	.	.	.	.								.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.					.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.							.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.																			.	.	.	.																			.	.	.	.	.	.																.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.																			.	.	.	.																			.	.	.	.	.	.																.	.	.	.	.
Query Sequence		N	T	I	P	Y	R	I	.	.	.	.	.	.	.	N	G	H	E	I	K	D	V	A	R	Y	S	E	L	T	L	T	G	.	.	.	.	V	L	Q	K	S	S	N	V	G	V	S	K	L	A	L	A	M	P	.	.	.	.	.	.	S	S	A	L	V	D	T	Y	S	R	F	G	L	G	K	.	.	.	.	.
Query Conservation									.	.	.	.	.	.	.																			.	.	.	.																			.	.	.	.	.	.																.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.																			.	.	.	.																			.	.	.	.	.	.																.	.	.	.	.
Template Conservation
Template Sequence		T	I	G	N	D	A	W	A	T	G	N	P	V	F	K	G	S	S	L	M	F	L	K	P	G	M	Q	V	P	V	S	Q	L	I	R	G	I	N	L	Q	S	G	N	D	A	C	V	A	M	A	D	F	A	A	G	S	Q	D	A	F	V	G	L	M	N	S	Y	V	N	A	L	G	L	K	N	T	H	F	Q	T
Template Known Secondary structure					G	G	G		G	G	G		G	G	G	T	T	S							T	T														T	T															S	S															T	T		S	S		B			S
Template Predicted Secondary structure
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	N	L	G	L	V	G	E	R	S	G	L	Y	P	Q	K	Q	R	W	S	D	I	E	R	A	T	F	S	F	G	Y	G	L	M	V	T	P	L	Q	L	A	R	V	Y	A	T	I	G	S	Y	G	I	Y	R	P	L	S	I	T	K	V	D	P	P	V	P	G	E	R	V	F	P	E	S	I	V	R	T	V
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.																.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.																.	.	.	.	.	.	.	.	.	.
Template Sequence		V	H	G	L	D	A	D	G	Q	Y	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	A	R	D	M	A	L	I	G	Q	A	L	I	R	D	.	.	.	.	V	P	N	E	Y	S	I	Y	K	E	K	E	F	T	F	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S	S					T	T		B	B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.						G	G	G	G							.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.																.	.	.	.	.	.	.	.	.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160																										.	.	.	.	.	.	.	.	.	170	.	.	.	.	.					.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		468	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	H	M	M	E	S	V	A	L	P	G	G	G	G	V	K	A	A	I	K	G	Y	R	I	A	I	K	T	G	T	A	K	K	V	G	P	D	G	R	Y	I	N	K	Y	I	A	Y	T	A	G	V	A	P	A	S	Q	P	R	F	A	L	V	V	V
Query Conservation
Alig confidence		.	.	.	.																																.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.																																.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	N	G	I	R	Q	L	N	R	N	G	L	L	W	D	N	S	L	N	V	D	G	I	K	T	G	H	T	D	K	A	G	.	.	.	.	.	.	.	.	.	.	Y	N	L	V	A	S	A	T	E	G	Q	M	R	L	I	S	A	V	M
Template Known Secondary structure		.	.	.	.	T	T						S		G	G	G	G		T	T	S											T	T	T		.	.	.	.	.	.	.	.	.	.										T	T
Template Predicted Secondary structure		.	.	.	.																																.	.	.	.	.	.	.	.	.	.
Template SS confidence
						191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.											.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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