Job Description P0ABK2 Confidence 2.44% Date Thu Jan 5 11:15:40 GMT 2012 Rank 46 Aligned Residues 93 % Identity 8% Template c3rkoK_ PDB info PDB header:oxidoreductase Chain: K: PDB Molecule:nadh-quinone oxidoreductase subunit k; PDBTitle: crystal structure of the membrane domain of respiratory complex i from2 e. coli at 3.0 angstrom resolution Resolution 3.00 Å

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		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	I	L	W	A	I	P	A	L	G	V	V	L	P	L	L	T	I	L	T	A	R	M	D	K	A	A	W	A	F	V	F	S	S	L	T	L	A	C	I	I	L	T	A	G	I	A	M	F	P	F	V	M	P	S	S	T	M	M	N	A	S	L	T	M	W	D	A	T	S	S	Q	L	T	L	N	V	M	T	W
Query Conservation
Alig confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	L	Q	H	G	L	I	L	A	A	I	L	F	V	L	G	L	T	G	L	V	I	R	R	N	L	L	F	M	L	I	G	L	E	I	M	I	N	A	S	A	L	A	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	V	A	G	S	Y	W	G	Q	T	D	G	Q	V	M	Y	I	L
Template Known Secondary structure																										B																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T		S
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.																			.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.			.	.	.	.	370	.	.	.
Predicted Secondary structure																									.	.
Query SS confidence																									.	.
Query Sequence		V	A	V	V	L	V	P	I	I	L	L	Y	T	A	W	C	Y	W	K	M	F	G	R	.	.	I	T	K	E	D	I	E	R
Query Conservation																									.	.
Alig confidence																									.	.
Template Conservation
Template Sequence		A	I	S	L	A	A	A	E	A	S	I	G	L	A	L	L	L	Q	L	H	R	R	R	Q	N	L	N	I	D	S	V	S	E
Template Known Secondary structure																				T	T	T	T		S	S		B	G	G	G
Template Predicted Secondary structure
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions