Job Description P0ABK2 Confidence 2.89% Date Thu Jan 5 11:15:40 GMT 2012 Rank 32 Aligned Residues 230 % Identity 10% Template c3mkuA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:multi antimicrobial extrusion protein (na(+)/drug PDBTitle: structure of a cation-bound multidrug and toxin compound extrusion2 (mate) transporter Resolution 4.20 Å

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		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	K	I	E	E	T	R	W	R	N	M	W	D	W	G	I	F	I	G	S	F	V	P	P	L	V	I	G	V	A	F	G	N	L	L	Q	G	V	P	F	N	V	D	E	Y	L	R	L	Y	Y	T	G	N	F	F	Q	L	L	N	P	F	G	L	L	A	G	V	V	S	V	G	M	I	I	T	Q	G	A	T
Query Conservation
Alig confidence																																															.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.
Template Sequence		F	H	K	P	Q	P	K	E	L	I	R	L	F	R	L	G	F	P	V	A	A	A	L	F	F	E	V	T	L	F	A	V	V	A	L	L	V	A	P	L	G	S	T	V	V	.	.	.	.	.	.	.	.	A	A	H	Q	V	A	L	N	F	S	S	L	V	F	M	F	P	M	S	I	G	A	A	V	S	I	R
Template Known Secondary structure				S	S	T	T	T	S	T	T	T	T																									T			S		S	T			.	.	.	.	.	.	.	.			T	T
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.									.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	L	Q	M	R	T	V	G	E	L	H	L	R	T	R	A	T	A	Q	V	A	A	L	V	T	L	V	C	F	A	L	A	G	V	W	V	M	Y	G	I	D	G	Y	V	V	K	S	T	M	D	H	Y	A	A	S	N	P	L	N	K	E	V	V	R	E	A	G	A	W	L	V	N	F	N	N	T	P	I	L	W
Query Conservation
Alig confidence											.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	G	H	K	L	G	E	Q	D	.	T	K	G	A	A	I	A	A	N	V	G	L	M	T	G	L	A	T	A	C	I	T	A	L	L	T	V	L	F	R	E	Q	I	A	L	L	Y	T	E	N	Q	V	V	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	M	Q	L	L	L	F	A	A
Template Known Secondary structure					G	G	G	S	S		.			T	T	T	T																														T	S	S		S	S	T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure											.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		302	.	.	.	.	.	.	.	310		.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.																.	.	.	.	360	.	.	.	.	.
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	P	A	L	G	V	V	L	P	L	L	T	I	L	T	A	R	M	D	K	A	A	W	A	F	V	F	S	S	L	T	L	A	C	I	I	L	T	A	G	I	A	M	F	P	F	V	M	P	S	S	T	M	M	N	A	S	L	T	M	W	D	A	T	S	S	Q	L	T	L	N	V	M	T	W	V	A	V	V
Query Conservation
Alig confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	Y	Q	C	M	D	A	V	Q	V	V	A	A	G	S	L	R	G	Y	K	D	M	T	A	I	F	H	R	T	F	I	S	Y	W	V	L	G	L	P	T	G	Y	I	L	G	M	T	N	W	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	Q	P	L	G	A	K	G	F	W	L	G	F	I	I
Template Known Secondary structure																		G	G	G	S	S																												S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.															.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	P	I	I	L	L	Y	T	A	W	C	Y	W	K	M	F	G	R	I	T	K	E	D	I	E	R	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	L	S	A	A	A	L	M	L	G	Q	R	L	Y	W	L	Q	K	Q	S	D	D	V	Q	L	H	L	A
Template Known Secondary structure										T	G	G	G	S	T	T	T			S	S		T	T	T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		432	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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