Job Description P0ABK2 Confidence 15.76% Date Thu Jan 5 11:15:40 GMT 2012 Rank 3 Aligned Residues 59 % Identity 10% Template c1qleB_ PDB info PDB header:oxidoreductase/immune system Chain: B: PDB Molecule:cytochrome c oxidase polypeptide ii; PDBTitle: cryo-structure of the paracoccus denitrificans four-subunit2 cytochrome c oxidase in the completely oxidized state3 complexed with an antibody fv fragment Resolution 3.0 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.						.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.
Query SS confidence																							.	.	.	.	.
Query Sequence		S	T	M	M	N	A	S	L	T	M	W	D	A	T	S	S	Q	L	T	L	N	.	.	.	.	.	V	M	T	W	V	A	V	V	L	V	P	I	I	L	L	Y	T	A	W	C	Y	W	K	M	F	G	R	I	T	K	E	D	I	E	R	N	T	H
Query Conservation																							.	.	.	.	.
Alig confidence																							.	.	.	.	.
Template Conservation
Template Sequence		G	K	P	V	N	G	G	M	N	F	Q	P	A	S	S	P	L	A	H	D	Q	Q	W	L	D	H	F	V	L	Y	I	I	T	A	V	T	I	F	V	C	L	L	L	L	I	C	I	V	R	F	N	R	R	A	N	P	V	P	A	R	F	T	H	N
Template Known Secondary structure		S				T	T			S		S				S																																			S	S	T	T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions