Return to main results Retrieve Phyre Job Id

Job DescriptionP46118
Confidence95.04%DateThu Jan 5 12:03:57 GMT 2012
Rank103Aligned Residues108
% Identity11%Templated2fbia1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13......20.........30.........40.........50.........60.........70.........80.........90..
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Query Sequence  HLSKSERKVAEVILASPDNAIHSSIAAMALEANVSEPTVNRFCRSMDTRGFPDFKLHLAQSLANGTPYVNRNVNEDDSVE
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Template Sequence  GLTEQQWRVIRILRQQGE. . . . MESYQLANQACILRPSMTGVLARL. . . . . . . ERDGIVRRWKAPKDQRRVYVNLTEKGQ
Template Known Secondary structure  T


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   31........40........ .50.........60.........70.. .......80.........90.........
 
   93......100.........110.........120.........130.
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Query Sequence  SYTGKIFESAMATLDHVRHSLDKSAINRAVDLLTQAKKI
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Template Sequence  QCFVSMSGDMEKNYQRIQERFGEEKLAQLLELLNELKKI
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TT
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   100.........110.........120.........130........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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