 |
Job Description | P46118 | Confidence | 86.48% | Date | Thu Jan 5 12:03:57 GMT 2012 |
Rank | 247 | Aligned Residues | 58 |
% Identity | 5% | Template | d1p4xa1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| MarR-like transcriptional regulators
|
Resolution | 2.20 |
|
 |
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | L | E | K | I | Q | S | Q | L | E | H | L | S | K | S | E | R | K | V | A | E | V | I | L | A | S | P | D | N | A | I | H | S | S | I | A | A | M | A | L | E | A | N | V | S | E | P | T | V | N | R | F | C | R | S | M | D | T | R | G | F |
Query Conservation |   |
  |   |   |   |
|   |   |   |   |   |   |
|
|   |   |
|   |   |
|
|   |
|
|
|   |
|   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |   |   |
|
|   |
|
|
|   |
|
|   |
|
|
|
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |   | . |   |
|
|   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   | . | . |   |   |
|   |   |
|
|
|   |   |
|   |   |   |   |   |   |
|
|   |   |
|   |   |
|
|   |   |
|   |
Template Sequence |   |
F | K | K | K | V | K | P | E | V | . |
D | M | T | I | K | E | F | I | L | L | T | Y | L | F | H | Q | Q | E | N | . |
. |
T | L | P | F | K | K | I | V | S | D | L | C | Y | K | Q | S | D | L | V | Q | H | I | K | V | L | V | K | H | S | Y |
Template Known Secondary structure |   |
 |  |  |  |  | T | T | T |
| . | S | S |
|  |  |  |  |  |  |  |  |  |  |  | S |
| S |
| S | . | . |  |  |  |  |  |  |  |  |  |  | S | S | S |
| G | G | G | T |  |  |  |  |  |  |  |  |  | T | T | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
22 | . | . | . | . | . | . | . | 30 | |
. | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | |
|
50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|