Job Description P46118 Confidence 73.24% Date Thu Jan 5 12:03:57 GMT 2012 Rank 374 Aligned Residues 52 % Identity 12% Template c3t72o_ PDB info PDB header:transcription/dna Chain: O: PDB Molecule:pho box dna (strand 1); PDBTitle: phob(e)-sigma70(4)-(rnap-betha-flap-tip-helix)-dna transcription2 activation sub-complex Resolution 4.33 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.			.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.
Query SS confidence																							.	.
Query Sequence		M	L	E	K	I	Q	S	Q	L	E	H	L	S	K	S	E	R	K	V	A	E	.	.	V	I	L	A	S	P	D	N	A	I	H	S	S	I	A	A	M	A	L	E	A	N	V	S	E	P	T	V	N	R	F	C	R	S
Query Conservation																							.	.
Alig confidence																							.	.								.	.	.
Template Conservation																																.	.	.
Template Sequence		L	R	A	A	T	H	D	V	L	A	G	L	T	A	R	E	A	K	V	L	R	M	R	F	G	I	D	M	N	T	.	.	.	D	Y	T	L	E	E	V	G	K	Q	F	D	V	T	R	E	R	I	R	Q	I	E	A	K
Template Known Secondary structure													S								T	T	T	T	T	S	S	S	S		S	.	.	.												S	S
Template Predicted Secondary structure																																.	.	.
Template SS confidence
		540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.				570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions