Return to main results Retrieve Phyre Job Id

Job DescriptionP46118
Confidence96.16%DateThu Jan 5 12:03:57 GMT 2012
Rank65Aligned Residues58
% Identity19%Templatec3r0aB_
PDB info PDB header:transcription regulatorChain: B: PDB Molecule:putative transcriptional regulator; PDBTitle: possible transcriptional regulator from methanosarcina mazei go1 (gi2 21227196)
Resolution2.31 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60...
Predicted Secondary structure 













Query SS confidence 



























































Query Sequence  LEKIQSQLEHLSKSERKVAEVILASPDNAIHSSIAAMALEANVSEPTVNRFCRSMDTRGF
Query Conservation     
      

  
  

 


 
       

  

    

 


 

 



  

Alig confidence 



























..





























Template Conservation   
  
    


  
  

  
      .. 

  


  
  
   


 
  
   

Template Sequence  VEDVIKCALNLTKADLNVXKSFLNEPDR. . WIDTDALSKSLKLDVSTVQRSVKKLHEKEI
Template Known Secondary structure  T

STT
..
B
TT

TTS
Template Predicted Secondary structure 






..





Template SS confidence 



























































   11........20.........30........ .40.........50.........60........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions