Job Description P46118 Confidence 70.89% Date Thu Jan 5 12:03:57 GMT 2012 Rank 401 Aligned Residues 97 % Identity 9% Template c3op9A_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:pli0006 protein; PDBTitle: crystal structure of transcriptional regulator from listeria innocua Resolution 1.90 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	S	P	D	N	A	I	H	S	S	I	A	A	M	A	L	E	A	N	V	S	E	P	T	V	N	R	F	C	R	S	M	D	T	R	G	F	P	D	F	K	L	H	L	A	Q	S	L	A	N	G	T	P	Y	V	N	R	N	V	N	E	D	D	S	V	E	S	Y	T	G	K	I	F	E	S	A	M	A	T
Query Conservation
Alig confidence																																																																		.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.	.	.	.
Template Sequence		L	S	R	L	K	K	E	H	G	L	K	N	H	Q	I	A	E	L	L	N	V	Q	T	R	T	V	A	Y	Y	X	S	G	E	T	K	P	D	I	E	K	L	I	R	L	A	T	Y	F	H	L	S	I	D	E	L	V	G	Y	V	Q	E	V	W	N	.	.	.	.	.	.	.	.	.	.	D	L	S	L	K	Q
Template Known Secondary structure										T											T	S											T	S	S															T								T							S	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.											.	.	.	.	.	80
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	H	V	R	H	S	L	D	K	S	A	I	N	R	A	V	D	L	L	T	Q	A	K	K	I	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	L	L	S	L	N	L	R	S	E	E	E	I	A	K	I	K	I	L	V	D	T	V	E	T	L	Y
Template Known Secondary structure						G	G	G	S																			S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions