Return to main results Retrieve Phyre Job Id

Job DescriptionP46118
Confidence94.20%DateThu Jan 5 12:03:57 GMT 2012
Rank126Aligned Residues56
% Identity14%Templatec3oioA_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:transcriptional regulator (arac-type dna-binding domain- PDBTitle: crystal structure of transcriptional regulator (arac-type dna-binding2 domain-containing proteins) from chromobacterium violaceum
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   16...20.........30.........40.........50.........60.........70...
Predicted Secondary structure 










Query SS confidence 

























































Query Sequence  KSERKVAEVILASPDNAIHSSIAAMALEANVSEPTVNRFCRSMDTRGFPDFKLHLAQS
Query Conservation    
  

 


 
       

  

    

 


 

 



  

 


  
   
Alig confidence 
















..






































Template Conservation    
      
   
   .. 
   

     
   
   
    
 
        
  
Template Sequence  PKLTEAVSLXEANIEEP. . LSTDDIAYYVGVSRRQLERLFKQYLGTVPSKYYLELRLN
Template Known Secondary structure  T
SSS
..

TS
TSS
Template Predicted Secondary structure 




..







Template SS confidence 

























































   219220.........230..... ....240.........250.........260.........270....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions