Job Description P46118 Confidence 95.00% Date Thu Jan 5 12:03:57 GMT 2012 Rank 105 Aligned Residues 138 % Identity 12% Template c3iz6A_ PDB info PDB header:ribosome Chain: A: PDB Molecule:40s ribosomal protein sa (s2p); PDBTitle: localization of the small subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome Resolution 5.50 Å

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		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	D	H	V	R	H	S	L	D	K	S	A	I	N	R	A	V	D	L	L	T	Q	A	K	K	I	A	F	F	G	L	G	S	S	A	A	V	A	H	D	A	M	N	K	F	F	R	F	N	V	P	V	V	Y	S	D	D	I	V	L	Q	R	M	S	C	M	N	C	S	D	G	D	V	V	V	L	I	S	H
Query Conservation
Alig confidence											.	.
Template Conservation											.	.
Template Sequence		N	L	G	K	T	W	E	K	L	.	.	Q	L	A	A	R	V	I	V	A	I	E	N	P	Q	D	I	I	V	Q	S	A	R	P	Y	G	Q	R	A	V	L	K	F	A	Q	Y	T	G	A	H	A	I	A	G	R	H	T	P	G	T	F	T	N	Q	L	Q	T	S	F	S	E	P	R	L	L	I	L	T	D	P
Template Known Secondary structure											.	.										T	T	S	S									S															T						S				T	T	T	T	T	T	T	T	T	S		S	S			S					S		T
Template Predicted Secondary structure											.	.
Template SS confidence
		54	.	.	.	.	.	60	.	.			.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	R	T	K	N	L	V	E	L	A	Q	L	A	R	E	N	D	A	M	V	I	A	L	T	S	A	G	T	P	L	A	R	E	A	T	L	A	I	T	L	D	V	P	E	D	T	D	I	Y	M	P	M	V	S	R	L	A	Q	L	T	V	I	D	V	L	A	T	G	F	T	L	R	R	G
Query Conservation
Alig confidence					.	.	.	.																									.												.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.																									.												.	.	.	.	.	.	.	.	.	.
Template Sequence		R	T	D	.	.	.	.	H	Q	P	I	K	E	S	A	L	G	N	I	P	T	I	A	F	C	D	T	D	S	P	M	.	R	Y	V	D	I	G	I	P	A	N	N	.	.	.	.	.	.	.	.	.	.	K	G	K	Q	S	I	G	C	L	F	W	L	L	A	R	M	V	L	Q	M	R	G
Template Known Secondary structure		T	T	T	.	.	.	.											T									T	T	S		G	.	G	G		S					S			.	.	.	.	.	.	.	.	.	.	S	S	T																	T	T	S
Template Predicted Secondary structure					.	.	.	.																									.												.	.	.	.	.	.	.	.	.	.
Template SS confidence
		132	.	.					.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.	160	.	.	.	.	.	.	.	.	.											170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions