 |
Job Description | P46118 | Confidence | 79.87% | Date | Thu Jan 5 12:03:57 GMT 2012 |
Rank | 320 | Aligned Residues | 39 |
% Identity | 10% | Template | c3f6wE_ |
PDB info |
PDB header:dna binding protein | Chain: E: PDB Molecule:xre-family like protein; |
PDBTitle: xre-family like protein from pseudomonas syringae pv. tomato str.2 dc3000
|
Resolution | 1.85 Å |
|
  |   |
15 | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | K | S | E | R | K | V | A | E | V | I | L | A | S | P | D | N | A | I | H | S | S | I | A | A | M | A | L | E | A | N | V | S | E | P | T | V | N | R | F |
Query Conservation |   |
|   |   |
|   |   |
|
|   |
|
|
|   |
|   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |   |   |
|
|   |
|
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|   |   |   |
|
|   |   |
|   |   | . |   |
|
|
|
|   |   |
|
|   |   |   |
|
|
|   |
|   |
|
|   |   |
Template Sequence |   |
N | A | R | Y | Q | A | L | L | D | L | L | L | E | A | R | S | A | . |
A | G | I | T | Q | K | E | L | A | A | R | L | G | R | P | Q | S | F | V | S | K | T |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  | T |
|
|  |  |  |  |  |  |  |  | T | S |
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | |
. | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|