Job Description P46118 Confidence 86.65% Date Thu Jan 5 12:03:57 GMT 2012 Rank 245 Aligned Residues 68 % Identity 15% Template c3bbnB_ PDB info PDB header:ribosome Chain: B: PDB Molecule:ribosomal protein s2; PDBTitle: homology model for the spinach chloroplast 30s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome. Resolution 9.40 Å

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		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	V	V	L	I	S	H	T	G	R	T	K	N	L	V	E	L	A	Q	L	A	R	E	N	D	A	M	V	I	A	L	T	S	A	G	T	P	L	A	R	E	A	T	L	A	I	T	L	D	V	P	E	D	T	D	I	Y	M	P	M	V	S	R	L	A	Q	L	T	V	I	D	V	L	A	T	G	F	T	L
Query Conservation
Alig confidence													.	.	.	.																								.													.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.																								.													.	.	.	.	.	.	.	.	.	.
Template Sequence		D	I	V	I	I	V	D	Q	Q	E	E	.	.	.	.	Y	T	A	L	R	E	C	I	T	L	G	I	P	T	I	C	L	I	D	T	N	C	N	.	P	D	L	A	D	I	S	I	P	A	N	D	.	.	.	.	.	.	.	.	.	.	D	A	I	A	S	I	R	L	I	L	T	K	L	V	F	A	I	C	E
Template Known Secondary structure		S					S		T	T	T	T	.	.	.	.									T	T	T									S	S	S		.		S	S		S							S	.	.	.	.	.	.	.	.	.	.	S	S
Template Predicted Secondary structure													.	.	.	.																								.													.	.	.	.	.	.	.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.					.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.											.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		257	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	R	S
Template Known Secondary structure		T	S	S
Template Predicted Secondary structure
Template SS confidence
		228	.	230

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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