Return to main results Retrieve Phyre Job Id

Job DescriptionP46118
Confidence71.08%DateThu Jan 5 12:03:57 GMT 2012
Rank397Aligned Residues48
% Identity19%Templatec2jqeA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:signal recognition 54 kda protein; PDBTitle: soution structure of af54 m-domain
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50........
Predicted Secondary structure 









Query SS confidence 






















































Query Sequence  LEKIQSQLEHLSKSERKVAEVILASPDNAIHSSIAAMALEANVSEPTVNRFCRSM
Query Conservation     
      

  
  

 


 
       

  

    

 


 

 


Alig confidence 















.......































Template Conservation 


  


 


  

.......  
 

  

  


 


    


 



 
Template Sequence  MKKFRVIMDSMTEEEL. . . . . . . LNPKIIDSSRIRRIAIGSGTSPQEVKELLNYY
Template Known Secondary structure  S
.......
GGG

TS
Template Predicted Secondary structure 


.......






Template SS confidence 






















































   361........370...... ...380.........390.........400........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions