Job Description P46118 Confidence 66.20% Date Thu Jan 5 12:03:57 GMT 2012 Rank 485 Aligned Residues 29 % Identity 14% Template c1zreB_ PDB info PDB header:gene regulation/dna Chain: B: PDB Molecule:catabolite gene activator; PDBTitle: 4 crystal structures of cap-dna with all base-pair2 substitutions at position 6, cap-[6g;17c]icap38 dna Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	I	A	A	M	A	L	E	A	N	V	S	E	P	T	V	N	R	F	C	R	S	M	D	T	R	G	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	T	R	Q	E	I	G	Q	I	V	G	C	S	R	E	T	V	G	R	I	L	K	M	L	E	D	Q	N	L
Template Known Secondary structure												T	S														T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions