Job Description P46118 Confidence 69.64% Date Thu Jan 5 12:03:57 GMT 2012 Rank 425 Aligned Residues 72 % Identity 8% Template c1pb6D_ PDB info PDB header:transcription Chain: D: PDB Molecule:hypothetical transcriptional regulator ycdc; PDBTitle: crystal structure of hypothetical transcriptional regulator ycdc Resolution 2.50 Å

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	H	S	S	I	A	A	M	A	L	E	A	N	V	S	E	P	T	V	N	R	F	C	R	S	M	D	T	R	G	F	P	D	F	K	L	H	L	A	Q	S	L	A	N	G	T	P	Y	V	N	R	N	V	N	E	D	D	S	V	E	S	Y	T	G	K	I	F	E	S	A	M	A	T	L	D	H
Query Conservation
Alig confidence																									.	.	.	.	.
Template Conservation																									.	.	.	.	.
Template Sequence		F	H	G	T	R	L	E	Q	I	A	E	L	A	G	V	S	K	T	N	L	L	Y	Y	.	.	.	.	.	F	P	S	K	E	A	L	Y	I	A	V	L	R	Q	I	L	D	I	W	L	A	P	L	K	A	F	R	E	D	F	A	P	L	A	A	I	K	E	Y	I	R	L	K	L	E	V	S	R	D
Template Known Secondary structure															T	S									.	.	.	.	.	S	S	S																	T					T			T	T	S
Template Predicted Secondary structure																									.	.	.	.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.						.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions