Job Description P27305 Confidence 99.26% Date Thu Jan 5 11:43:51 GMT 2012 Rank 30 Aligned Residues 273 % Identity 18% Template d1ivsa4 SCOP info Adenine nucleotide alpha hydrolase-like Nucleotidylyl transferase Class I aminoacyl-tRNA synthetases (RS), catalytic domain Resolution 2.90

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		9	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.						.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Predicted Secondary structure															.																									.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.																									.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	E	M	T	D	T	Q	Y	I	G	R	F	A	.	P	S	P	S	G	E	L	H	F	G	S	L	I	A	A	L	G	S	Y	L	Q	A	R	A	.	.	.	.	.	R	Q	G	R	W	L	V	R	I	E	D	I	D	P	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation															.																									.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.																									.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	K	S	G	K	P	P	F	V	I	F	M	P	P	P	N	V	T	G	S	L	H	M	G	H	A	L	D	N	S	L	Q	D	A	L	I	R	Y	K	R	M	R	G	F	E	A	V	W	L	P	G	T	D	H	A	G	I	A	T	Q	V	V	V	E	R	L	L	L	K	E	G	K	T	R	H	D	L	G	R	E
Template Known Secondary structure		T	T			S											B	S	S	S																						T	T	T	S									B			T													T	T	T			G	G	G	S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
									61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.				.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.								.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																							.	.	.																										.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.																							.	.	.																										.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	R	E	V	P	G	A	A	E	T	I	L	R	Q	L	E	H	Y	G	L	H	W	D	.	.	.	G	D	V	L	W	Q	S	Q	R	H	D	A	Y	R	E	A	L	A	W	L	H	E	Q	G	L	.	.	.	.	.	.	.	S	Y	Y	C	T	C	T	R	A	R	I	Q	S	I	G	G
Query Conservation		.	.	.	.	.	.	.																							.	.	.																										.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																							.	.	.																										.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	F	L	E	R	V	W	Q	W	K	E	E	S	G	G	T	I	L	K	Q	L	K	R	L	G	A	S	A	D	W	S	R	E	A	F	T	M	D	E	K	R	S	R	A	V	R	Y	A	F	S	R	Y	Y	H	E	G	L	A	Y	R	A	P	R	L	V	N	W	C	P	R	C	E	T	T	L	S	D	L	E	V
Template Known Secondary structure																									T	T					G	G	G				T	T	S																T	T	S	S												T	T	T	T					G	G	G	B
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.																																														.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	Y	D	G	H	C	R	V	L	H	H	G	P	D	N	A	A	V	R	I	R	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	H	P	V	T	Q	F	T	D	Q	L	R	G
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	T	C	S	R	C	G	T	P	I	E	Y	A	I	F	P	Q	W	W	L	R	M	R	P	L	A	E	E	V	L	K	G	L	R	R	G	D	I	A	F	V	P	E	R	W	K	K	V	N	M	D	W	L	E	N	V	K	D	W	N	I	S	R	Q	L	W	W	G	H	Q	I	P	A	W	Y	C	E	D	C	Q
Template Known Secondary structure				B	T	T	T		S																												T					S	S	S	T											T											S	S	S									T	T	T
Template Predicted Secondary structure
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
		159	160	.	.	.	.												.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.														.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Query Sequence		I	I	H	A	D	E	.	.	.	.	.	.	.	.	.	.	.	K	L	A	R	E	D	F	I	I	H	R	R	D	G	L	F	A	Y	N	L	A	V	V	V	D	D	H	F	Q	G	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	E	I	V	R	G	A	D	L	.	I	E	P	T	V	R	Q	I	S
Query Conservation								.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template Conservation
Template Sequence		A	V	N	V	P	R	P	E	R	Y	L	E	D	P	T	S	C	E	A	C	G	S	P	R	L	K	R	D	E	D	V	F	D	T	W	F	S	S	A	L	W	P	L	S	T	L	G	W	P	E	E	T	E	D	L	K	A	F	Y	P	G	D	V	L	V	T	G	Y	D	I	L	F	L	W	V	S	R	M	E	V
Template Known Secondary structure								G	G	G	T	T					S		T	T	T			S																T	S		T	T	T	T	T	T	T	T	T	T		S					S		S	B	S						G	G	G	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		422	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.
		214	.	.	.	.	.	220	.	.	.			.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.					.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure												.	.																									.	.	.	.
Query SS confidence												.	.																									.	.	.	.
Query Sequence		L	Y	Q	L	F	G	W	K	V	P	.	.	D	Y	I	H	L	P	L	A	L	N	P	Q	G	A	K	L	S	K	Q	N	H	A	P	A	.	.	.	.	L	P	K	G	D	P	R	P	V	L	I	A	A	L	Q	F	L	G	Q	Q	A	E	A	H	W	Q	D	F	S	V	E	Q	I	L	Q	S
Query Conservation												.	.																									.	.	.	.
Alig confidence												.	.																									.	.	.	.																			.	.
Template Conservation																																																												.	.
Template Sequence		S	G	Y	H	F	M	G	E	R	P	F	K	T	V	L	L	H	G	L	V	L	D	E	K	G	Q	K	M	S	K	S	K	G	N	V	I	D	P	L	E	M	V	E	R	Y	G	A	D	A	L	R	F	A	L	I	Y	L	A	.	.	T	G	G	Q	D	I	R	L	D	L	R	W	L	E	M	A
Template Known Secondary structure							S	S	S		S	B	S											T	T	S	S	B		B	T	T	T	T	B																									.	.		T	T
Template Predicted Secondary structure																																																												.	.
Template SS confidence
		502	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.			560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions