Job Description P27305 Confidence 99.64% Date Thu Jan 5 11:43:51 GMT 2012 Rank 25 Aligned Residues 213 % Identity 13% Template c3tqoA_ PDB info PDB header:ligase Chain: A: PDB Molecule:cysteinyl-trna synthetase; PDBTitle: structure of the cysteinyl-trna synthetase (cyss) from coxiella2 burnetii. Resolution 2.30 Å

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		11	.	.	.	.	.	.	.	.	20				.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.						.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.														.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.																										.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.																										.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	T	D	T	Q	Y	I	G	R	F	.	.	.	A	P	S	P	S	G	E	L	H	F	G	S	L	I	A	A	L	G	S	Y	L	Q	A	R	A	.	.	.	.	.	R	Q	G	R	W	L	V	R	I	E	D	I	D	P	P	R	.	.	.	.	.	.	.	.	.	.	.	.	.	E	V	P	G	A	A	E	T
Query Conservation												.	.	.																										.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.																										.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	P	I	E	S	G	K	V	K	L	Y	V	C	G	X	T	V	Y	D	Y	X	H	I	G	H	G	R	S	W	I	I	F	D	X	V	V	R	Y	L	R	X	R	G	Y	E	V	T	F	V	R	N	I	T	D	I	D	D	K	I	I	K	R	A	G	E	N	K	E	S	P	A	A	L	A	E	R	F	I	Q	I
Template Known Secondary structure				S	S	T	T										B	T	T	S			B																				T	T									B	B													T	T	S
Template Predicted Secondary structure
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.						.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.
Query SS confidence																																												.	.	.	.	.
Query Sequence		I	L	R	Q	L	E	H	Y	G	L	H	W	D	G	D	V	L	W	Q	S	Q	R	H	D	A	Y	R	E	A	L	A	W	L	H	E	Q	G	L	S	Y	Y	C	.	.	.	.	.	T	C	T	R	A	R	I	Q	S	I	G	G	I	Y	D	G	H	C	R	V	L	H	H	G	P	D	N	A	A	V	R	I	R
Query Conservation																																												.	.	.	.	.
Alig confidence																																												.	.	.	.	.																																.	.
Template Conservation																																																																																.	.
Template Sequence		L	H	E	D	E	K	A	L	R	V	L	S	P	D	Q	E	P	R	A	T	Q	Y	V	P	E	I	I	K	L	I	Q	K	L	L	D	N	Q	Y	A	Y	T	G	Q	N	G	D	V	F	F	D	V	R	R	F	K	D	Y	G	K	L	S	H	R	H	L	D	S	K	R	D	P	L	D	F	V	L	W	K	.	.
Template Known Secondary structure										T					S	B			B	G	G	G																T	S					T	T	S						T	T	T		T	T	T	T	T	T	T	T		S					S	S	T	T							.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.				.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure																																													.	.	.																				.
Query SS confidence																																													.	.	.																				.
Query Sequence		Q	Q	H	P	V	T	Q	F	T	D	Q	L	R	G	I	I	H	A	D	E	K	L	A	R	E	D	F	I	I	H	R	R	D	G	L	F	A	Y	N	L	A	V	V	.	.	.	V	D	D	H	F	Q	G	V	T	E	I	V	R	G	A	D	L	I	E	.	P	T	V	R	Q	I	S	L	Y	Q	L	F	G	W
Query Conservation																																													.	.	.																				.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.																				.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	A	K	P	G	E	P	K	W	D	S	P	W	G	E	G	R	P	G	W	H	I	E	C	S	A	X	S	S	S	I	L	G	Q	P	F	D	I	H	G	G	G	L	D	L	K	F	P	H	H	E	N	E	I	A	Q	S	E	A	G	E	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T	S			B			T	T		S																			S	S								G	G	G	T	T	T														S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																				187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		221	.	.			.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure					.	.
Query SS confidence					.	.
Query Sequence		K	V	P	.	.	D	Y	I	H	L	P	L	A	L	N	P	Q	G	A	K	L	S	K	Q	N	H
Query Conservation					.	.
Alig confidence					.	.							.
Template Conservation													.
Template Sequence		K	P	F	V	K	L	W	X	H	A	G	.	L	L	E	I	N	K	E	K	X	S	K	S	L	G
Template Known Secondary structure		S											.					T	T					T	T	T	T
Template Predicted Secondary structure													.
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.		260	.	.	.	.	.	.	.	.	.	270	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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