Job Description P27305 Confidence 98.35% Date Thu Jan 5 11:43:51 GMT 2012 Rank 49 Aligned Residues 177 % Identity 19% Template c3prhB_ PDB info PDB header:ligase Chain: B: PDB Molecule:tryptophanyl-trna synthetase; PDBTitle: tryptophanyl-trna synthetase val144pro mutant from b. subtilis Resolution 2.80 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.					.	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.									.	.
Query SS confidence																																			.	.	.	.									.	.
Query Sequence		P	S	G	E	L	H	F	G	S	L	I	A	A	L	G	S	Y	L	Q	A	R	A	R	Q	G	R	W	L	V	R	I	E	D	.	.	.	.	I	D	P	P	R	E	V	P	.	.	G	A	A	E	T	I	L	R	Q	L	E	H	Y	G	L	H	W	D	G	D	V	L	W	Q	S	Q	R	H	D	A	Y	R	E
Query Conservation																																			.	.	.	.									.	.
Alig confidence																								.											.	.	.	.									.	.
Template Conservation																								.
Template Sequence		P	S	G	S	V	T	L	G	N	Y	I	G	A	M	K	Q	F	V	E	L	Q	H	.	D	Y	N	S	Y	F	C	I	V	D	Q	H	A	I	T	V	P	Q	D	R	L	E	L	R	K	N	I	R	N	L	A	A	L	Y	L	A	V	G	L	D	P	E	K	A	T	L	F	I	Q	S	E	V	P	A	H	A	Q
Template Known Secondary structure				S			B							T							T	T	T	.	T	S												T	T	S																					T	T			T	T	T	S					G	G	G		T
Template Predicted Secondary structure																								.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	A	W	L	H	E	Q	G	L	S	Y	Y	C	T	C	T	R	A	R	I	Q	S	I	G	G	I	Y	D	G	H	C	R	V	L	H	H	G	P	D	N	A	A	V	R	I	R	Q	Q	H	P	V	T	Q	F	T	D	Q	L	R	G	I	I	H	A	D	E	K	L	A	R	E	D	F	I	I	H	R	R	D
Query Conservation
Alig confidence							.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	G	W	M	M	.	.	.	.	.	.	.	Q	C	V	A	Y	I	G	E	L	E	R	M	V	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							.	.	.	.	.	.	.		T	T	S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure							.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		90	.	.	.	.								.	.	.	.	.	100	.	.	.	.	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.								.	.	.	.	.	.	.	240	.	.	.	.	.			.	.	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.														.	.
Query SS confidence																																																									.	.	.	.	.	.	.														.	.
Query Sequence		G	L	F	A	Y	N	L	A	V	V	V	D	D	H	F	Q	G	V	T	E	I	V	R	G	A	D	L	I	E	P	T	V	R	Q	I	S	L	Y	Q	L	F	G	W	K	V	P	D	Y	I	H	L	P	L	A	L	.	.	.	.	.	.	.	N	P	Q	G	A	K	L	S	K	Q	N	H	A	.	.	P	A	L
Query Conservation																																																									.	.	.	.	.	.	.														.	.
Alig confidence																																																									.	.	.	.	.	.	.														.	.
Template Conservation
Template Sequence		G	L	L	T	Y	P	P	L	M	A	A	D	I	L	L	Y	G	T	D	L	V	P	P	G	E	D	Q	K	Q	H	L	E	L	T	R	N	L	A	E	R	F	N	K	K	Y	N	D	I	F	T	I	P	E	V	K	I	A	R	I	M	S	L	N	D	P	L	K	K	M	S	K	S	D	P	N	Q	K	A	Y	I
Template Known Secondary structure					T											T	T	T								T	T																			T															B		S	S		T	T	S	B			T	T		S	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	K	G	D	P	R	P	V	L	I	A	A	L	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	L	L	D	E	P	K	Q	L	E	K	K	I	K
Template Known Secondary structure		B	T	T
Template Predicted Secondary structure
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions