Job Description P27305 Confidence 98.11% Date Thu Jan 5 11:43:51 GMT 2012 Rank 58 Aligned Residues 186 % Identity 23% Template c3p0jD_ PDB info PDB header:ligase Chain: D: PDB Molecule:tyrosyl-trna synthetase; PDBTitle: leishmania major tyrosyl-trna synthetase in complex with tyrosinol,2 triclinic crystal form 1 Resolution 2.89 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.									.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.		.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.								.																					.							.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.								.																					.							.	.	.
Query Sequence		S	P	S	G	E	L	H	F	G	S	L	I	A	A	L	G	S	Y	L	Q	A	R	A	R	Q	G	R	W	L	V	R	I	E	D	.	.	.	.	.	.	.	.	I	D	P	P	R	E	V	.	P	G	A	A	E	T	I	L	R	Q	L	E	H	Y	G	L	H	W	D	G	.	D	V	L	W	Q	S	.	.	.
Query Conservation																																				.	.	.	.	.	.	.	.								.																					.							.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.								.																					.							.	.	.
Template Conservation
Template Sequence		E	P	S	G	R	M	H	I	A	Q	G	I	F	K	A	V	N	V	N	K	C	T	A	A	G	C	E	F	V	F	W	V	A	D	W	F	A	L	M	N	D	K	V	G	G	E	L	E	K	I	R	I	V	G	R	Y	L	I	E	V	W	K	A	A	G	M	D	M	D	K	V	L	F	L	W	S	S	E	E	I
Template Known Secondary structure					S	S		B																		T																T		S	T	T																				T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
			90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	Q	R	H	D	A	Y	R	E	A	L	A	W	L	H	E	Q	G	L	S	Y	Y	C	T	C	T	R	A	R	I	Q	S	I	G	G	I	Y	D	G	H	C	R	V	L	H	H	G	P	D	N	A	A	V	R	I	R	Q	Q	H	P	V	T	Q	F	T	D	Q	L	R	G	I	I	H	A	D	E	K	L	A	R
Query Conservation		.
Alig confidence		.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	S	H	A	D	T	Y	W	R	M	V	L	D	I	G	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	N	T	I	A	R	I	K	K	C
Template Known Secondary structure			T	T														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S							T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.																																																							.	.	.	.	140	.	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.					.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.		.	.	.	.	.	.	.	.	230	.	.	.	.	.	.			.	.	.	240	.
Predicted Secondary structure															.	.	.	.																																									.																.	.
Query SS confidence															.	.	.	.																																									.																.	.
Query Sequence		E	D	F	I	I	H	R	R	D	G	L	F	A	.	.	.	.	Y	N	L	A	V	V	V	D	D	H	F	Q	G	V	T	E	I	V	R	G	A	D	L	I	E	P	T	V	R	Q	I	S	L	Y	Q	L	F	G	W	K	.	V	P	D	Y	I	H	L	P	L	A	L	N	P	Q	G	.	.	A	K	L	S	K
Query Conservation															.	.	.	.																																									.																.	.
Alig confidence															.	.	.	.																																									.																.	.
Template Conservation
Template Sequence		C	T	I	M	G	K	T	E	G	T	L	T	A	A	Q	V	L	Y	P	L	M	Q	C	C	D	I	F	F	L	K	A	D	I	C	Q	L	G	L	D	Q	R	K	V	N	M	L	A	R	E	Y	C	D	L	I	G	R	K	L	K	P	V	I	L	S	H	H	M	L	A	G	L	K	Q	G	Q	A	K	M	S	K
Template Known Secondary structure						T	S			S	S			S	S		S													T	T		S					B	G	G	G															T										B						S	S	T	T		S	S			S
Template Predicted Secondary structure
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	N	H	A	P	A	L	P	K	G	D	P	R	P	V	L	I	A	A	L	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	D	P	D	S	A	I	F	M	E	D	T	E	E	D	V	A	R	K	I	R
Template Known Secondary structure		S		G	G	G	S		B	T	T
Template Predicted Secondary structure
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions