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Job DescriptionP27305
Confidence99.71%DateThu Jan 5 11:43:51 GMT 2012
Rank22Aligned Residues185
% Identity19%Templatec3fnrA_
PDB info PDB header:transferaseChain: A: PDB Molecule:arginyl-trna synthetase; PDBTitle: crystal structure of putative arginyl t-rna synthetase from2 campylobacter jejuni;
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   16...20.........30.........40.... .... .50.........60
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Query Sequence  YIGRFAPSPSGELHFGSLIAALGSYLQAR. . ARQG. . . RWLVRIEDIDPP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  LLEYVSANPTGPLHIGHARGAVFGDTLTRLARHLGYKFNTEYYVNDAGNQIYLLGLSILLSVKESILHENVEYPEQYYKG
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SSSS
BGGGTT



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S
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   107..110.........120.........130.........140.........150.........160.........170.........180......
 
   61........70.........80.........90.........100.........110.
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . REVPGAAETILRQLEHYGLHWDGDVLWQSQRHDAYREALAWLHEQGLSYYC
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Template Sequence  EYIVDLAKEAFEKFGKEFFSEENIPSLADWAKDKMLVLIKQNLEQAKIKID. SYVSERSYYDALNATLESLKEHK. . . . .
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GGG
SGGGTT


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GGGGSTTTT.....
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   187..190.........200.........210.........220.........230....... ..240.........250.........260
 
   112.......120.........130.........140.........150.........160.........170.........180.. ......
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Query Sequence  TCTRARIQSIGGIYDGHCRVLHHGPDNAAVRIRQQHPVTQFTDQLRGIIHADEKLAREDFIIHRRDGLFAY. . . NLAVVV
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GIYEQEGKIWLASSQKGDEKDRVIIREDGRGTYLAADIVYHK
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TT
GGGGT
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TTS
B
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   261........270.........280.........290.........300..
 
   189190.........200 .........210.........220........ .230.........240....
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Query Sequence  DDHFQGVTEIVR. . GADLIEPTVRQISLYQLFGWKVPDYIHL. . PLALNPQGAKLSKQNH
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Template Sequence  DKMSRGYGKCINIWGADHHGYIPRMKAAMEFLGFDSNNLEIILAQMVSLLKDGEPYKMAG
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SGGGGGGTTT

GGG

TT




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   303......310.........320.........330.........340.........350.........360..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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