Job Description P27305 Confidence 99.77% Date Thu Jan 5 11:43:51 GMT 2012 Rank 21 Aligned Residues 227 % Identity 14% Template c3c8zB_ PDB info PDB header:ligase Chain: B: PDB Molecule:cysteinyl-trna synthetase; PDBTitle: the 1.6 a crystal structure of mshc: the rate limiting2 enzyme in the mycothiol biosynthetic pathway Resolution 1.60 Å

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		11	.	.	.	.	.	.	.	.		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.						.	.	.	.	50	.	.	.	.	.	.	.	.														.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure											.																											.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.																											.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	T	D	T	Q	Y	I	G	R	.	F	A	P	S	P	S	G	E	L	H	F	G	S	L	I	A	A	L	G	S	Y	L	Q	A	R	A	.	.	.	.	.	R	Q	G	R	W	L	V	R	I	E	D	I	D	.	.	.	.	.	.	.	.	.	.	.	.	.	P	P	R	E	V	P	G	A	A	E	T	I	L
Query Conservation											.																											.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.																											.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	P	G	P	T	A	T	M	Y	V	C	G	I	T	P	Y	D	A	T	H	L	G	H	A	A	T	Y	L	T	F	D	L	V	H	R	L	W	L	D	A	G	H	T	V	Q	Y	V	Q	N	V	T	D	V	D	D	P	L	F	E	R	A	E	R	D	G	I	D	W	R	T	L	G	D	R	E	T	Q	L	F	R
Template Known Secondary structure					S	S										T	T	S			B																				T	T												S												T
Template Predicted Secondary structure
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.				.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.											.	.
Predicted Secondary structure																																													.	.	.																							.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.																							.	.	.	.	.	.	.	.	.	.
Query Sequence		R	Q	L	E	H	Y	G	L	H	W	D	G	D	V	L	W	Q	S	Q	R	H	D	A	Y	R	E	A	L	A	W	L	H	E	Q	G	L	S	Y	Y	C	T	C	T	.	.	.	R	A	R	I	Q	S	I	G	G	I	Y	D	G	H	C	R	V	L	H	H	G	P	.	.	.	.	.	.	.	.	.	.	D	N
Query Conservation																																													.	.	.																							.	.	.	.	.	.	.	.	.	.
Alig confidence																																													.	.	.																							.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	D	M	A	A	L	R	V	L	P	P	H	D	Y	V	A	A	T	D	A	I	A	E	V	V	E	M	V	E	K	L	L	A	S	G	A	A	Y	I	V	E	D	A	E	Y	P	D	V	Y	F	R	A	D	A	T	A	Q	F	G	Y	E	S	G	Y	D	R	D	T	M	L	T	L	F	A	E	R	G	G	D	P
Template Known Secondary structure							T	T					S					G	G	G																T	S					S		S	S	S							T	T	S	S	T	T	T	T	T	T	T														T	T			T
Template Predicted Secondary structure
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.					.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.
Query SS confidence																																																																			.	.	.	.
Query Sequence		A	A	V	R	I	R	Q	Q	H	P	V	T	Q	F	T	D	Q	L	R	G	I	I	H	A	D	E	K	L	A	R	E	D	F	I	I	H	R	R	D	G	L	F	A	Y	N	L	A	V	V	V	D	D	H	F	Q	G	V	T	E	I	V	R	G	A	D	.	.	.	.	L	I	E	P	T	V	R	Q	I	S	L
Query Conservation																																																																			.	.	.	.
Alig confidence																																			.	.	.	.	.	.																											.	.	.	.
Template Conservation																																			.	.	.	.	.	.
Template Sequence		D	R	P	G	K	S	D	Q	L	D	A	L	L	W	R	A	E	R	P	G	E	P	S	W	P	S	P	F	G	R	G	R	P	.	.	.	.	.	.	G	W	H	V	E	C	S	A	I	A	L	T	R	I	G	T	G	L	D	I	Q	G	G	G	S	D	L	I	F	P	H	H	E	Y	S	A	A	H	A	E	S
Template Known Secondary structure		T		T	T		S	S	T	T										T	T	S			B			T	T		S				.	.	.	.	.	.														T		T	T								G	G	G	T	T	T
Template Predicted Secondary structure																																			.	.	.	.	.	.
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.							.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Q	L	F	G	W	K	V	P	D	Y	I	H	L	P	L	A	L	N	P	Q	G	A	K	L	S	K	Q	N	H
Query Conservation
Alig confidence																	.
Template Conservation																	.
Template Sequence		V	T	G	E	R	R	F	A	R	H	Y	V	H	T	G	.	M	I	G	V	L	V	S	Q	L	R	A	Q	G	V
Template Known Secondary structure						S		S		S							.		B			B							T	T
Template Predicted Secondary structure																	.
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.		.	.	.	.	.	.	.	.	290	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions