Job Description P27305 Confidence 100.00% Date Thu Jan 5 11:43:51 GMT 2012 Rank 3 Aligned Residues 291 % Identity 30% Template c3al0C_ PDB info PDB header:ligase/rna Chain: C: PDB Molecule:glutamyl-trna(gln) amidotransferase subunit c, glutamyl- PDBTitle: crystal structure of the glutamine transamidosome from thermotoga2 maritima in the glutamylation state. Resolution 3.37 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	P	Y	F	L	F	K	E	M	T	D	T	Q	Y	I	G	R	F	A	P	S	P	S	G	E	L	H	F	G	S	L	I	A	A	L	G	S	Y	L	Q	A	R	A	R	Q	G	R	W	L	V	R	I	E	D	I	D	P	P	R	E	V	P	G	A	A	E	T	I	L	R	Q	L	E	H	Y	G	L	H	W
Query Conservation
Alig confidence						.	.	.
Template Conservation						.	.	.
Template Sequence		I	P	K	K	.	.	.	I	R	R	C	F	E	L	V	R	V	R	F	A	P	S	P	T	G	H	L	H	V	G	G	A	R	T	A	L	F	N	W	M	F	A	R	K	E	G	G	K	F	I	L	R	I	E	D	T	D	T	E	R	S	S	R	E	Y	E	Q	Q	I	L	E	S	L	R	W	C	G	L	D	W
Template Known Secondary structure						.	.	.																S	S	S			B																		T							B					S	S	S																T	T
Template Predicted Secondary structure						.	.	.
Template SS confidence
		94	.	.	.				.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		82	.	.	.									.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.
Query Sequence		D	G	D	V	.	.	.	.	.	.	.	.	L	W	Q	S	Q	R	H	D	A	Y	R	E	A	L	A	W	L	H	E	Q	G	L	S	Y	Y	C	T	C	T	R	A	R	I	Q	S	I	G	G	I	Y	D	G	H	C	R	V	L	H	H	G	P	D	N	A	A	V	R	I	R	Q	Q	H	P	V	T	Q	F	T
Query Conservation						.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	E	G	P	D	I	G	G	D	F	G	P	Y	R	Q	S	E	R	L	E	I	Y	R	E	Y	A	E	K	L	V	E	D	K	R	A	Y	Y	V	V	Y	D	K	E	D	P	S	K	E	L	F	T	T	Y	E	Y	P	H	E	Y	K	E	K	G	H	P	V	T	I	K	F	K	V	L	P	G	K	T	S	F	E
Template Known Secondary structure		S	B	B	T	T	T	B		T	T				B	S	T	T															T	T	T								T	T										S	S								T	T											S	S
Template Predicted Secondary structure
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Q	L	R	G	I	I	H	A	D	E	K	L	A	R	E	D	F	I	I	H	R	R	D	G	L	F	A	Y	N	L	A	V	V	V	D	D	H	F	Q	G	V	T	E	I	V	R	G	A	D	L	I	E	P	T	V	R	Q	I	S	L	Y	Q	L	F	G	W	K	V	P	D	Y	I	H	L	P	L	A	L	N
Query Conservation
Alig confidence														.
Template Conservation														.
Template Sequence		D	L	L	K	G	Y	M	E	F	D	N	S	.	T	L	E	D	F	I	I	M	K	S	N	G	F	P	T	Y	N	F	A	V	V	V	D	D	H	L	M	R	I	S	H	V	F	R	G	E	D	H	L	S	N	T	P	K	Q	L	M	I	Y	E	A	F	G	W	E	A	P	V	F	M	H	I	P	L	I	L	G
Template Known Secondary structure			T	T	T		S					S	S	.	S	S								T	T	S															T	T		S	B					G	G	G	G	G	G									T	T	T	T					B								B
Template Predicted Secondary structure														.
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.		.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.					.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure																	.	.	.	.
Query SS confidence																	.	.	.	.
Query Sequence		P	Q	G	A	K	L	S	K	Q	N	H	A	P	A	L	.	.	.	.	P	K	G	D	P	R	P	V	L	I	A	A	L	Q	F	L	G	Q	Q	A	E	A	H	W	Q	D	F	S	V	E	Q	I	L	Q	S	A	V	K	N	W	R	L	T	A	V	P	E	S	A	I	V	N	S
Query Conservation																	.	.	.	.
Alig confidence																	.	.	.	.																								.									.	.	.	.
Template Conservation																																												.									.	.	.	.
Template Sequence		S	D	R	T	P	L	S	K	R	H	G	A	T	S	V	E	H	F	R	R	E	G	I	L	S	R	A	L	M	N	Y	L	A	L	L	G	W	R	V	E	G	D	.	E	I	F	T	I	E	E	K	.	.	.	.	L	Q	S	F	D	P	K	D	I	S	N	K	G	V	I	F	D
Template Known Secondary structure		T	T	S	S	B			T	T	T		S	S	B							T	T											T	T	T	T	B				S		.	S				T	T	T	T	.	.	.	.	G	G	G			T	T	S	B		S	S			B
Template Predicted Secondary structure																																												.									.	.	.	.
Template SS confidence
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.		.	.	.	.	400	.	.	.					.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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