Job Description P27305 Confidence 100.00% Date Thu Jan 5 11:43:51 GMT 2012 Rank 10 Aligned Residues 254 % Identity 33% Template c3aiiA_ PDB info PDB header:ligase Chain: A: PDB Molecule:glutamyl-trna synthetase; PDBTitle: archaeal non-discriminating glutamyl-trna synthetase from2 methanothermobacter thermautotrophicus Resolution 1.65 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	P	Y	F	L	F	K	E	M	T	D	T	Q	Y	I	G	R	F	A	P	S	P	S	G	E	L	H	F	G	S	L	I	A	A	L	G	S	Y	L	Q	A	R	A	R	Q	G	R	W	L	V	R	I	E	D	I	D	P	P	R	E	V	P	G	A	A	E	T	I	L	R	Q	L	E	H	Y	G	L	H	W
Query Conservation
Alig confidence						.	.	.					.
Template Conservation						.	.	.					.
Template Sequence		L	R	E	L	.	.	.	A	G	V	K	.	G	E	V	V	L	R	F	A	P	N	P	S	G	P	L	H	I	G	H	A	R	A	A	I	L	N	H	E	Y	A	R	K	Y	D	G	R	L	I	L	R	I	E	D	T	D	P	R	R	V	D	P	E	A	Y	D	M	I	P	A	D	L	E	W	L	G	V	E	W
Template Known Secondary structure						.	.	.	S	S			.	S										S	S	S	S		B																	T	T												G	G	G			T	T													T
Template Predicted Secondary structure						.	.	.					.
Template SS confidence
		87	.	.	90				.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		D	G	D	V	L	W	Q	S	Q	R	H	D	A	Y	R	E	A	L	A	W	L	H	E	Q	G	L	S	Y	Y	C	T	C	T	R	A	R	I	Q	S	I	G	G	I	.	Y	D	G	H	C	R	V	L	H	H	G	P	D	N	A	A	V	R	I	R	Q	Q	H	P	V	T	Q	F	T	D	Q	L	R	G	I	I
Query Conservation																																													.
Alig confidence			.																																										.
Template Conservation			.
Template Sequence		D	.	E	T	V	I	Q	S	D	R	M	E	T	Y	Y	E	Y	T	E	K	L	I	E	R	G	G	A	Y	V	C	T	C	R	P	E	E	F	R	E	L	K	N	R	G	E	A	C	H	C	R	S	L	G	F	R	E	N	L	Q	R	W	R	E	M	F	E	M	K	E	G	S	A	V	V	R	V	K	T	D	L
Template Known Secondary structure		S	.					G	G	G	G														T	T	S						S											T	T				G	G	G	G													G	G	G	S		T	T	S									T
Template Predicted Secondary structure			.
Template SS confidence
		163		.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.													.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	A	D	E	K	L	A	R	E	D	F	I	I	H	R	.	.	.	.	.	.	.	.	.	.	.	.	R	D	G	L	F	A	Y	N	L	A	V	V	V	D	D	H	F	Q	G	V	T	E	I	V	R	G	A	D	L	I	E	P	T	V	R	Q	I	S	L	Y	Q	L	F	G	W	K	V	P	D	Y	I	H	L
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.													.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.
Template Conservation				.																																																			.	.	.	.	.
Template Sequence		N	H	.	P	N	P	A	I	R	D	W	V	S	M	R	I	V	E	A	E	H	P	R	T	G	T	R	Y	R	V	Y	P	M	M	N	F	S	V	A	V	D	D	H	L	L	G	V	T	H	V	L	R	A	.	.	.	.	.	N	R	E	K	Q	E	Y	L	Y	R	H	L	G	W	E	P	P	E	F	I	H	Y
Template Known Secondary structure		T		.	S	S	G	G	G	T	T									S		B	T	T	T	B	T	S																		T	T								.	.	.	.	.													T
Template Predicted Secondary structure				.																																																			.	.	.	.	.
Template SS confidence
		242	.		.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.						.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.							.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.
Query Sequence		P	L	A	L	N	P	Q	G	A	K	L	S	K	Q	N	H	A	P	A	L	P	K	G	.	.	.	.	.	.	D	P	R	P	V	L	I	A	A	L	Q	F	L	G	Q	Q	A	E	A	H	W	Q	D
Query Conservation																									.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.														.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.
Template Sequence		G	R	.	.	.	.	.	.	.	.	L	K	T	S	G	A	R	E	G	I	L	R	G	E	Y	S	G	W	D	D	P	R	L	G	T	L	R	A	I	A	R	R	G	I	R	P	E	A	I	R	K	L
Template Known Secondary structure				.	.	.	.	.	.	.	.	B												S	S			S	T	T		T	T	S		B							T	T
Template Predicted Secondary structure				.	.	.	.	.	.	.	.
Template SS confidence
		321	.									.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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