Job Description P27305 Confidence 97.36% Date Thu Jan 5 11:43:51 GMT 2012 Rank 75 Aligned Residues 187 % Identity 14% Template c2ts1A_ PDB info PDB header:ligase (synthetase) Chain: A: PDB Molecule:tyrosyl-trna synthetase; PDBTitle: structure of tyrosyl-t/rna synthetase refined at 2.3 angstroms2 resolution. interaction of the enzyme with the tyrosyl adenylate3 intermediate Resolution 2.30 Å

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		24	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.																				.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure						.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	S	G	E	.	L	H	F	G	S	L	I	A	A	L	G	S	Y	L	Q	A	R	A	R	Q	G	R	W	L	V	R	I	E	D	I	D	P	P	R	E	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	A	E	T	I	L	R	Q	L	E	H	Y	G	L	H	W	D	G
Query Conservation						.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.								.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.
Template Sequence		P	T	A	D	S	L	H	I	G	H	L	A	.	T	I	L	T	M	R	R	F	Q	Q	A	G	H	R	P	I	A	L	V	G	G	A	T	G	L	I	G	D	P	S	G	K	K	S	E	R	T	L	N	A	K	E	T	V	E	A	W	S	A	R	I	K	E	Q	L	G	R	F	L	D	F	E	A	D	G	N	P
Template Known Secondary structure			S	S	S	S		B	G	G	G			.											T	T									T	T	G	G	G	T				T	T		S	S																						T	T	S	S		S	S		S	S	S
Template Predicted Secondary structure														.
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
			84	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure		.												.	.
Query SS confidence		.												.	.
Query Sequence		.	D	V	L	W	Q	S	Q	R	H	D	A	.	.	Y	R	E	A	L	A	W	L	H	E	Q	G	L	S	Y	Y	C	T	C	T	R	A	R	I	Q	S	I	G	G	I	Y	D	G	H	C	R	V	L	H	H	G	P	D	N	A	A	V	R	I	R	Q	Q	H	P	V	T	Q	F	T	D	Q	L	R	G	I	I
Query Conservation		.												.	.
Alig confidence		.												.	.												.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	K	I	K	N	N	Y	D	W	I	G	P	L	D	V	I	T	F	L	R	D	V	G	K	H	.	.	.	.	.	.	.	F	S	V	N	Y	M	M	A	K	E	S	V	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							T					T	T										T	G	G	G	.	.	.	.	.	.	.								T	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																											.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.								.	.	.	.	.	.	.	150	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.					.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.
Query SS confidence																																			.	.	.	.
Query Sequence		H	A	D	E	K	L	A	R	E	D	F	I	I	H	R	R	D	G	L	F	A	Y	N	L	A	V	V	V	D	D	H	F	Q	.	.	.	.	G	V	T	E	I	V	R	G	A	D	L	I	E	P	T	V	R	Q	I	S	L	Y	Q	L	F	G	W	K	V	P	D	Y	I	H	L	P	L	A	L	N	P	Q	G
Query Conservation																																			.	.	.	.
Alig confidence		.	.	.											.	.	.	.	.																.	.	.	.																											.
Template Conservation		.	.	.											.	.	.	.	.																																														.
Template Sequence		.	.	.	S	R	I	E	T	G	I	S	F	T	.	.	.	.	.	E	F	S	Y	M	M	L	Q	A	Y	D	F	L	R	L	Y	E	T	E	G	C	R	L	Q	I	G	G	S	D	Q	W	G	N	I	T	A	G	L	E	L	I	R	K	T	K	.	G	R	A	F	G	L	T	I	P	L	V	T	K	A	D	G
Template Known Secondary structure		.	.	.	T	T	T	T	T						.	.	.	.	.																												G	G	G																.														T	T	S
Template Predicted Secondary structure		.	.	.											.	.	.	.	.																																														.
Template SS confidence
					156	.	.	.	160	.	.	.	.	.						.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.			.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure													.	.
Query SS confidence													.	.
Query Sequence		A	K	L	S	K	Q	N	H	A	P	A	.	.	L	P	K	G	D	P	R	P	V	L	I	A	A	L	Q
Query Conservation													.	.
Alig confidence													.	.
Template Conservation
Template Sequence		T	K	F	G	K	T	E	S	G	T	I	W	L	D	K	E	K	T	S	P	Y	E	F	Y	Q	F	W	I
Template Known Secondary structure				T	T			S	S				B	S	S	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions