Job Description P27305 Confidence 100.00% Date Thu Jan 5 11:43:51 GMT 2012 Rank 11 Aligned Residues 281 % Identity 31% Template c2o5rA_ PDB info PDB header:ligase Chain: A: PDB Molecule:glutamyl-trna synthetase 1; PDBTitle: crystal structure of glutamyl-trna synthetase 1 (ec 6.1.1.17)2 (glutamate-trna ligase 1) (glurs 1) (tm1351) from thermotoga maritima3 at 2.5 a resolution Resolution 2.34 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.									.	.
Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.	.	.
Query Sequence		Y	I	G	R	F	A	P	S	P	S	G	E	L	H	F	G	S	L	I	A	A	L	G	S	Y	L	Q	A	R	A	R	Q	G	R	W	L	V	R	I	E	D	I	D	P	P	R	E	V	P	G	A	A	E	T	I	L	R	Q	L	E	H	Y	G	L	H	W	D	G	D	V	.	.	.	.	.	.	.	.	L	W
Query Conservation																																																																								.	.	.	.	.	.	.	.
Alig confidence																																																																								.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	R	V	R	F	A	P	S	P	T	G	F	L	H	V	G	G	A	R	T	A	L	F	N	F	L	F	A	R	K	E	K	G	K	F	I	L	R	I	E	D	T	D	L	E	R	S	E	R	E	Y	E	E	K	L	X	E	S	L	R	W	L	G	L	L	W	D	E	G	P	D	V	G	G	D	H	G	P	Y	R
Template Known Secondary structure												S			B																		T							B			S	S			S	G	G	G														T				S	B	B	T	T	T	B		T	T				B
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.										.	.	.	.	.	.			.	130	.	.	.	.	.	.									.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.							.	.									.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.							.	.									.	.	.	.	.	.	.	.
Query Sequence		Q	S	Q	R	H	D	A	Y	R	E	A	L	A	W	L	H	E	Q	G	L	S	Y	Y	C	T	C	T	R	A	R	I	Q	S	I	G	.	.	.	.	.	.	.	.	.	G	I	Y	D	G	H	.	.	C	R	V	L	H	H	G	P	.	.	.	.	.	.	.	.	D	N	A	A	V	R	I	R	Q	Q	H	P
Query Conservation																																					.	.	.	.	.	.	.	.	.							.	.									.	.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.	.							.	.									.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	S	E	R	V	E	I	Y	R	E	H	A	E	R	L	V	K	E	G	K	A	Y	Y	V	Y	A	Y	P	E	E	I	E	E	X	R	E	K	L	L	S	E	G	K	A	P	H	Y	S	Q	E	X	F	E	K	F	D	T	P	E	R	R	R	E	Y	E	E	K	G	L	R	P	A	V	F	F	K	X	P	R	K
Template Known Secondary structure		G	G	G	G														T	T	S								S	T	T	T										T	T					B		G	G	G	G	T	T	T												T	T											S	S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	Q	F	T	D	Q	L	R	G	I	I	H	A	D	E	K	L	A	R	E	D	F	I	I	H	R	R	D	G	L	F	A	Y	N	L	A	V	V	V	D	D	H	F	Q	G	V	T	E	I	V	R	G	A	D	L	I	E	P	T	V	R	Q	I	S	L	Y	Q	L	F	G	W	K	V	P	D	Y	I	H	L
Query Conservation
Alig confidence																			.
Template Conservation																			.
Template Sequence		D	Y	V	L	N	D	V	V	K	G	E	V	V	F	K	T	G	.	A	I	G	D	F	V	I	X	R	S	N	G	L	P	T	Y	N	F	A	C	V	V	D	D	X	L	X	E	I	T	H	V	I	R	G	D	D	H	L	S	N	T	L	R	Q	L	A	L	Y	E	A	F	E	K	A	P	P	V	F	A	H	V
Template Known Secondary structure								T	T	T							T	T	.	S	S		B						T	T	S		B													T	T		S						G	G	G														T	T
Template Predicted Secondary structure																			.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.		.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.					.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure																						.	.	.	.
Query SS confidence																						.	.	.	.
Query Sequence		P	L	A	L	N	P	Q	G	A	K	L	S	K	Q	N	H	A	P	A	L	.	.	.	.	P	K	G	D	P	R	P	V	L	I	A	A	L	Q	F	L	G	Q	Q	A	E	A	H	W	Q	D	F	S	V	E	Q	I	L	Q	S	A	V	K	N	W	R	L	T	A	V	P	E	S	A	I	V	N	S
Query Conservation																						.	.	.	.
Alig confidence																						.	.	.	.																																				.	.	.	.
Template Conservation																																																													.	.	.	.
Template Sequence		S	T	I	L	G	P	D	G	K	K	L	S	K	R	H	G	A	T	S	V	E	A	F	R	D	X	G	Y	L	P	E	A	L	V	N	Y	L	A	L	L	G	W	S	H	P	E	G	K	E	L	L	T	L	E	E	L	I	S	S	.	.	.	.	F	S	L	D	R	L	S	P	N	P	A	I	F	D
Template Known Secondary structure							T	T	S	S	B			G	G	G	S			B								T												T	S	S	B			T	T														.	.	.	.			G	G	G	B		S	S
Template Predicted Secondary structure																																																													.	.	.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.					300	.	.	.	.	.	.	.	.	.	310	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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