Job Description P27305 Confidence 100.00% Date Thu Jan 5 11:43:51 GMT 2012 Rank 8 Aligned Residues 286 % Identity 30% Template c2ja2A_ PDB info PDB header:ligase Chain: A: PDB Molecule:glutamyl-trna synthetase; PDBTitle: mycobacterium tuberculosis glutamyl-trna synthetase Resolution 1.65 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																																																												.	.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.	.
Query Sequence		M	T	D	T	Q	Y	I	G	R	F	A	P	S	P	S	G	E	L	H	F	G	S	L	I	A	A	L	G	S	Y	L	Q	A	R	A	R	Q	G	R	W	L	V	R	I	E	D	I	D	P	P	R	E	V	P	G	A	A	E	T	I	L	R	Q	L	E	H	Y	G	L	H	W	D	G	D	.	.	.	.	.	.
Query Conservation																																																																												.	.	.	.	.	.
Alig confidence																																																																												.	.	.	.	.	.
Template Conservation
Template Sequence		T	A	T	E	T	V	R	V	R	F	C	P	S	P	T	G	T	P	H	V	G	L	V	R	T	A	L	F	N	W	A	Y	A	R	H	T	G	G	T	F	V	F	R	I	E	D	T	D	A	Q	R	D	S	E	E	S	Y	L	A	L	L	D	A	L	R	W	L	G	L	D	W	D	E	G	P	E	V	G	G	P
Template Known Secondary structure			S												S	S	S	S		B																		T							B					T	T	T																	T				S	B	B	T	T	T	B		T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
				85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.									.	.	.	.	.	.	.	130	.	.	.	.	.	.									.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure		.	.																																							.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.
Query SS confidence		.	.																																							.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.
Query Sequence		.	.	V	L	W	Q	S	Q	R	H	D	A	Y	R	E	A	L	A	W	L	H	E	Q	G	L	S	Y	Y	C	T	C	T	R	A	R	I	Q	S	I	G	.	.	.	.	.	.	.	.	G	I	Y	D	G	H	C	R	V	L	H	H	G	P	.	.	.	.	.	.	.	.	D	N	A	A	V	R	I	R	Q	Q
Query Conservation		.	.																																							.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.
Alig confidence		.	.																																							.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	G	P	Y	R	Q	S	Q	R	A	E	I	Y	R	D	V	L	A	R	L	L	A	A	G	E	A	Y	H	A	F	S	T	P	E	E	V	E	A	R	H	V	A	A	G	R	N	P	K	L	G	Y	D	N	F	D	R	H	L	T	D	A	Q	R	A	A	Y	L	A	E	G	R	Q	P	V	V	R	L	R	M	P
Template Known Secondary structure		T				B	G	G	G															T	T	S																		T	T			T	T	S					G	G	G	G												T	T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.						.	220	.
Predicted Secondary structure																																																																										.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.
Query Sequence		H	P	V	T	Q	F	T	D	Q	L	R	G	I	I	H	A	D	E	K	L	A	R	E	D	F	I	I	H	R	R	D	G	L	F	A	Y	N	L	A	V	V	V	D	D	H	F	Q	G	V	T	E	I	V	R	G	A	D	L	I	E	P	T	V	R	Q	I	S	L	Y	Q	L	F	.	.	.	.	.	G	W	K
Query Conservation																																																																										.	.	.	.	.
Alig confidence																					.																																																					.	.	.	.	.
Template Conservation																					.
Template Sequence		D	D	D	L	A	W	N	D	L	V	R	G	P	V	T	F	A	A	G	.	S	V	P	D	F	A	L	T	R	A	S	G	D	P	L	Y	T	L	V	N	P	C	D	D	A	L	M	K	I	T	H	V	L	R	G	E	D	L	L	P	S	T	P	R	Q	L	A	L	H	Q	A	L	I	R	I	G	V	A	E	R
Template Known Secondary structure		S	S							T	T	T							T	T	.		S				B	S	B		T	T	S		B													T	T								G	G	G	G	G	G														T	T	S
Template Predicted Secondary structure																					.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.					.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.
Query SS confidence																													.	.	.	.
Query Sequence		V	P	D	Y	I	H	L	P	L	A	L	N	P	Q	G	A	K	L	S	K	Q	N	H	A	P	A	L	.	.	.	.	P	K	G	D	P	R	P	V	L	I	A	A	L	Q	F	L	G	Q	Q	A	E	A	H	W	Q	D	F	S	V	E	Q	I	L	Q	S	A	V	K	N	W	R	L	T	A	V	P	E	S	A
Query Conservation																													.	.	.	.
Alig confidence																													.	.	.	.																																				.	.	.	.
Template Conservation																																																																				.	.	.	.
Template Sequence		I	P	K	F	A	H	L	P	T	V	L	G	E	G	T	K	K	L	S	K	R	D	P	Q	S	N	L	F	A	H	R	D	R	G	F	I	P	E	G	L	L	N	Y	L	A	L	L	G	W	S	I	A	D	D	H	D	L	F	G	L	D	E	M	V	A	A	.	.	.	.	F	D	V	A	D	V	N	S	S	P
Template Known Secondary structure														S	S	S	S	B			T	T	S	G	G	G	B								T												T	S	S			S		S	S													.	.	.	.			G	G	G				S
Template Predicted Secondary structure																																																																				.	.	.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.					.	.	.	310	.	.	.	.	.	.
		298	.	300	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	N	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	R	F	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		317	.	.	320

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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