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Job DescriptionP27305
Confidence99.00%DateThu Jan 5 11:43:51 GMT 2012
Rank34Aligned Residues186
% Identity18%Templatec2g36A_
PDB info PDB header:ligaseChain: A: PDB Molecule:tryptophanyl-trna synthetase; PDBTitle: crystal structure of tryptophanyl-trna synthetase (ec 6.1.1.2)2 (tryptophan-trna ligase)(trprs) (tm0492) from thermotoga maritima at3 2.50 a resolution
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24.....30.........40.........50...... ...60.........70.........80... ......90.....
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Query Sequence  PSGELHFGSLIAALGSYLQARARQGRWLVRIED. . . . . . . IDPPREVPGAAETILRQLEHYGLHWDG. DVLWQSQRHDAY
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Template Sequence  PTGKLHIGHLVGALENWVKLQEEGNECFYFVADWHALTTHYDDVSKLKEYTRDLVRGFLACGIDPEKSVIFVQSGVKEHA
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   910.........20.........30.........40.........50.........60.........70.........80........
 
   96...100.........110.........120.........130.........140.........150.........160.........170.....
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Query Sequence  REALAWLHEQGLSYYCTCTRARIQSIGGIYDGHCRVLHHGPDNAAVRIRQQHPVTQFTDQLRGIIHADEKLAREDFIIHR
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Template Sequence  ELALL. . . . . . . . FSMIVSVSRLERVPTYKEIDLST. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  ........TTS
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   8990... ......100.........110......
 
   176...180.........190.........200.........210......... 220.........230 .........240.......
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Query Sequence  RDGLFAYNLAVVVDDHFQGVTEIVRGADLIEPTVRQISLYQLFG. . . . . . WKVPDYIHLPL. . ALNPQGAKLSKQNHAPA
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Template Sequence  . AGFLIYPVLQAADILIYKAEGVPVGEDQVYHIELTREIARRFNYLYDEVFPEPEAILSRVPKLPGTDGRKMSKSYG. NI
Template Known Secondary structure  .TTTT
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   124.....130.........140.........150.........160.........170.........180.........190......... 200.
 
   248.250.........260...
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Query Sequence  LPKGDPRPVLIAALQF
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Template Sequence  INLEISEKELEQTILR
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   202.......210.......
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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