Job Description P27305 Confidence 98.75% Date Thu Jan 5 11:43:51 GMT 2012 Rank 40 Aligned Residues 207 % Identity 18% Template c2cybA_ PDB info PDB header:ligase Chain: A: PDB Molecule:tyrosyl-trna synthetase; PDBTitle: crystal structure of tyrosyl-trna synthetase complexed with2 l-tyrosine from archaeoglobus fulgidus Resolution 1.80 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.								.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90			.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.																																.								.	.
Query SS confidence																															.	.	.	.	.	.	.																																.								.	.
Query Sequence		P	S	G	E	L	H	F	G	S	L	I	A	A	L	G	S	Y	L	Q	A	R	A	R	Q	G	R	W	L	V	.	.	.	.	.	.	.	R	I	E	D	I	D	P	P	R	E	V	P	G	A	A	E	T	I	L	R	Q	L	E	H	Y	G	L	H	W	D	G	.	D	V	L	W	Q	S	Q	.	.	R	H	D
Query Conservation																															.	.	.	.	.	.	.																																.								.	.
Alig confidence													.																		.	.	.	.	.	.	.																																.								.	.
Template Conservation													.
Template Sequence		P	S	G	E	I	H	L	G	H	M	M	.	T	V	Q	K	L	M	D	L	Q	E	A	G	F	E	I	I	V	L	L	A	D	I	H	A	Y	L	N	E	K	G	T	F	E	E	I	A	E	V	A	D	Y	N	K	K	V	F	I	A	L	G	L	D	E	S	R	A	K	F	V	L	G	S	E	Y	Q	L	S	R
Template Known Secondary structure				S			B						.											T	T															T	T																					T	T			T	T	T						G	G	G	T	T	T	S
Template Predicted Secondary structure													.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	R	E	A	L	A	W	L	H	E	Q	G	L	S	Y	Y	C	T	C	T	R	A	R	I	Q	S	I	G	G	I	Y	D	G	H	C	R	V	L	H	H	G	P	D	N	A	A	V	R	I	R	Q	Q	H	P	V	T	Q	F	T	D	Q	L	R	G	I	I	H	A	D	E	K	L	A	R	E	D	F	I	I
Query Conservation
Alig confidence														.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	Y	V	L	D	V	L	K	M	A	R	I	.	.	.	.	.	.	.	T	T	L	N	R	A	R	R	S	M	D	E	V	S	R	R	K	E	D	P	M	V	S	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure														.	.	.	.	.	.	.	S									T	T	T	T		S		S	S	S			T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure														.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.								.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	R	R	D	G	L	F	A	Y	N	L	A	V	V	V	D	D	H	F	Q	G	V	T	E	I	V	R	G	A	D	L	I	E	P	T	V	R	Q	I	S	L	Y	Q	L	F	G	W	K	V	P	D	Y	I	H	L	P	L	A	L	N	P	Q	G	A	K	L	S	K	Q	N	H	A	P	A	L	P	K	G	D	P
Query Conservation
Alig confidence		.	.	.	.	.	.																																																																				.
Template Conservation		.	.	.	.	.	.																																																																				.
Template Sequence		.	.	.	.	.	.	M	I	Y	P	L	M	Q	A	L	D	I	A	H	L	G	V	D	L	A	V	G	G	I	D	Q	R	K	I	H	M	L	A	R	E	N	L	P	R	L	G	Y	S	S	P	V	C	L	H	T	P	I	L	V	G	L	D	G	Q	K	M	S	S	S	K	G	N	Y	.	I	S	V	R	D	P
Template Known Secondary structure		.	.	.	.	.	.														T	T		S						G	G	G											G	G	G	G	T													B		T	T	S	S	B			T	T	T	T		S	.		B	T	T
Template Predicted Secondary structure		.	.	.	.	.	.																																																																				.
Template SS confidence
								156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	P	V	L	I	A	A	L	Q	F	L	G	Q	Q	A	E	A	H	W	Q	D	F	S	V	E	Q	I	L	Q	S
Query Conservation
Alig confidence												.
Template Conservation												.
Template Sequence		P	E	E	V	E	R	K	I	R	K	.	A	Y	C	P	A	G	V	V	E	E	N	P	I	L	D	I	A	K	Y
Template Known Secondary structure											T	.	S				T	T			T	T
Template Predicted Secondary structure												.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.		.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions