Return to main results Retrieve Phyre Job Id

Job DescriptionP27305
Confidence97.99%DateThu Jan 5 11:43:51 GMT 2012
Rank61Aligned Residues187
% Identity15%Templatec1h3eA_
PDB info PDB header:ligaseChain: A: PDB Molecule:tyrosyl-trna synthetase; PDBTitle: tyrosyl-trna synthetase from thermus thermophilus complexed2 with wild-type trnatyr(gua) and with atp and tyrosinol
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24... ..30.........40.........50.. .... ...60.........70...... ...80... ..
Predicted Secondary structure 



.



......
.....






.....






.
Query SS confidence 



.
























. . . . . .



. . . . .



















. . . . .






.

Query Sequence  PSGE. LHFGSLIAALGSYLQARARQGRWLV. . . . . . RIED. . . . . IDPPREVPGAAETILRQLEH. . . . . YGLHWDG. DV
Query Conservation 


 .



  
 

 
 
 

   
  

......



.....

  
        
   
 
.....


  

.  
Alig confidence 



.
























......



.....



















.....






.

Template Conservation 

  







    
   
  
   
 



 

 






   
  
  
 
  
   
  
    
  
     
Template Sequence  PTRPDLHLGHAVVLRKMRQFQELGHKVVLIIGDFTGMIGDPSGRSKTRPPLTLEETRENAKTYVAQAGKILRQEPHLFEL
Template Known Secondary structure 
SSS

BTTT

TT


SS
SS





TTTS


TTT
Template Predicted Secondary structure 


























Template SS confidence 















































































   46...50.........60.........70.........80.........90.........100.........110.........120.....
 
   86...90.... .....100.........110.........120.........130.........140.........150.........160...
Predicted Secondary structure 

..































Query SS confidence 








. .




































































Query Sequence  LWQSQRHDA. . YREALAWLHEQGLSYYCTCTRARIQSIGGIYDGHCRVLHHGPDNAAVRIRQQHPVTQFTDQLRGIIHAD
Query Conservation    

 
   ..
      

  
 

 
 


 
       
   

           


         
   
     
Alig confidence 








..





..






















......................................
Template Conservation 
 

 
         
 ..
    

  

    

 
   
......................................
Template Sequence  RYNSEWLEGLTFKEVVR. . LTSLMTVAQMLEREDFKKRYEAG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TTT

..GGGS
TTSTT......................................
Template Predicted Secondary structure 




..





......................................
Template SS confidence 















































































   126...130.........140.. .......150.........160.....
 
   164.....170.........180 .........190.........200.........210.........220.........230....... .
Predicted Secondary structure 











....






















.
Query SS confidence 
















. . . .
























































.
Query Sequence  EKLAREDFIIHRRDGLF. . . . AYNLAVVVDDHFQGVTEIVRGADLIEPTVRQISLYQLFGWKVPDYIHLPLALNPQGA. K
Query Conservation        
 

 
 

 
....

 

 



   







 
 
  
  
  
  


   
 
 
 


    
 .
Alig confidence  .............



....
























































.
Template Conservation  .............  

  

 





 
   
   

 

 

 


  



  
        

 


   

  
Template Sequence  . . . . . . . . . . . . . IPISLHELLYPFAQAYDSVAIRADVEMGGTDQRFNLLVGREVQRAYGQSPQVCFLMPLLVGLDGREK
Template Known Secondary structure  .............



GGGGTTT
SGGGTT






B
TTSSSB
Template Predicted Secondary structure  .............
























Template SS confidence 















































































   166...170.........180.........190.........200.........210.........220.........230..
 
   239240.........250.........260....
Predicted Secondary structure 








Query SS confidence 

























Query Sequence  LSKQNHAPALPKGDPRPVLIAALQFL
Query Conservation 



     
  
         
  
Alig confidence 






.

















Template Conservation 



 

.

 

 

    
   
 
Template Sequence  MSKSLDN. YIGLTEPPEAMFKKLMRV
Template Known Secondary structure 

TTTT
.

BTTS
TTS
Template Predicted Secondary structure 






.





Template SS confidence 

























   233...... 240.........250.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions