Job Description P27305 Confidence 100.00% Date Thu Jan 5 11:43:51 GMT 2012 Rank 12 Aligned Residues 281 % Identity 34% Template c1g59A_ PDB info PDB header:ligase/rna Chain: A: PDB Molecule:glutamyl-trna synthetase; PDBTitle: glutamyl-trna synthetase complexed with trna(glu). Resolution 2.40 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.									.	.
Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.	.	.
Query Sequence		Y	I	G	R	F	A	P	S	P	S	G	E	L	H	F	G	S	L	I	A	A	L	G	S	Y	L	Q	A	R	A	R	Q	G	R	W	L	V	R	I	E	D	I	D	P	P	R	E	V	P	G	A	A	E	T	I	L	R	Q	L	E	H	Y	G	L	H	W	D	G	D	V	.	.	.	.	.	.	.	.	L	W
Query Conservation																																																																								.	.	.	.	.	.	.	.
Alig confidence																																																																								.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	V	T	R	I	A	P	S	P	T	G	D	P	H	V	G	T	A	Y	I	A	L	F	N	Y	A	W	A	R	R	N	G	G	R	F	I	V	R	I	E	D	T	D	R	A	R	Y	V	P	G	A	E	E	R	I	L	A	A	L	K	W	L	G	L	S	Y	D	E	G	P	D	V	A	A	P	T	G	P	Y	R
Template Known Secondary structure											S	S	S		B																	T	T							B					T	T	T			T	T												T	T				S	B		S	S	S			S	S	S		S	B
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.				.	.	.	.	.	130	.	.	.	.	.	.									.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																							.	.	.													.	.	.	.	.	.	.	.											.
Query SS confidence																																							.	.	.													.	.	.	.	.	.	.	.											.
Query Sequence		Q	S	Q	R	H	D	A	Y	R	E	A	L	A	W	L	H	E	Q	G	L	S	Y	Y	C	T	C	T	R	A	R	I	Q	S	I	G	G	I	.	.	.	Y	D	G	H	C	R	V	L	H	H	G	P	.	.	.	.	.	.	.	.	D	N	A	A	V	R	I	R	Q	Q	.	H	P	V	T	Q	F	T	D	Q
Query Conservation																																							.	.	.													.	.	.	.	.	.	.	.											.
Alig confidence																																							.	.	.													.	.	.	.	.	.	.	.											.
Template Conservation
Template Sequence		Q	S	E	R	L	P	L	Y	Q	K	Y	A	E	E	L	L	K	R	G	W	A	Y	R	A	F	E	T	P	E	E	L	E	Q	I	R	K	E	K	G	G	Y	D	G	R	A	R	N	I	P	P	E	E	A	E	E	R	A	R	R	G	E	P	H	V	I	R	L	K	V	P	R	P	G	T	T	E	V	K	D	E
Template Known Secondary structure		G	G	G	G													T	T	T	S																		S	S	S				G	G	G	G	S											T	T											S	S								T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	G	I	I	H	A	D	E	K	L	A	R	E	D	F	I	I	H	R	R	D	G	L	F	A	Y	N	L	A	V	V	V	D	D	H	F	Q	G	V	T	E	I	V	R	G	A	D	L	I	E	P	T	V	R	Q	I	S	L	Y	Q	L	F	G	W	K	V	P	D	Y	I	H	L	P	L	A	L	N	P	Q
Query Conservation
Alig confidence												.
Template Conservation												.
Template Sequence		L	R	G	V	V	V	Y	D	N	Q	.	E	I	P	D	V	V	L	L	K	S	D	G	Y	P	T	Y	H	L	A	N	V	V	D	D	H	L	M	G	V	T	D	V	I	R	A	E	E	W	L	V	S	T	P	I	H	V	L	L	Y	R	A	F	G	W	E	A	P	R	F	Y	H	M	P	L	L	R	N	P	D
Template Known Secondary structure		T	T							G	G	.	G	S								T	T	S		B													T	T								G	G	G	T	T	T											T	T													B		T	T
Template Predicted Secondary structure												.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		236	.	.	.	240	.	.	.	.	.	.	.	.					.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure															.	.	.	.
Query SS confidence															.	.	.	.
Query Sequence		G	A	K	L	S	K	Q	N	H	A	P	A	L	.	.	.	.	P	K	G	D	P	R	P	V	L	I	A	A	L	Q	F	L	G	Q	Q	A	E	A	H	W	Q	D	F	S	V	E	Q	I	L	Q	S	A	V	K	N	W	R	L	T	A	V	P	E	S	A	I	V	N	S
Query Conservation															.	.	.	.
Alig confidence															.	.	.	.																																				.	.	.	.
Template Conservation																																																						.	.	.	.
Template Sequence		K	T	K	I	S	K	R	K	S	H	T	S	L	D	W	Y	K	A	E	G	F	L	P	E	A	L	R	N	Y	L	C	L	M	G	F	S	M	P	D	G	R	E	I	F	T	L	E	E	F	I	Q	A	.	.	.	.	F	T	W	E	R	V	S	L	G	G	P	V	F	D
Template Known Secondary structure		S	S	B			T	T	T	S			B							T	T													T	T	B			T	T														.	.	.	.			G	G	G	B			S			B
Template Predicted Secondary structure																																																						.	.	.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.					.	.	.	.	.	.	.	300	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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