Job Description P52052 Confidence 100.00% Date Thu Jan 5 12:05:02 GMT 2012 Rank 3 Aligned Residues 309 % Identity 35% Template d1p9ra_ SCOP info P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain) Resolution 2.50

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.				.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.														.
Query SS confidence																								.	.	.														.
Query Sequence		M	E	E	I	V	A	L	S	V	K	H	N	V	S	D	L	H	L	C	S	A	W	.	.	.	P	A	R	W	R	I	R	G	R	M	E	A	A	.	P	F	D	T	P	D	V	E	E	L	L	R	E	W	L	D	D	D	Q	R	A	I	L	L	E	N	G	Q	L	D	F	A	V	S	L	A	E	N	Q	R	L
Query Conservation																								.	.	.														.
Alig confidence																								.	.	.														.																																					.	.
Template Conservation																																																																													.	.
Template Sequence		I	N	A	X	L	G	E	A	I	K	E	G	A	S	D	I	H	I	E	T	F	E	K	T	L	S	I	R	F	R	V	D	G	V	L	R	E	V	L	A	P	S	R	K	L	S	S	L	L	V	S	R	V	K	V	X	A	K	L	D	I	A	E	K	R	V	P	Q	D	G	R	I	S	L	A	.	.	V	D	V
Template Known Secondary structure													T		S								T	T									T	T										G	G	G												T	T			T	T			S	S										.	.
Template Predicted Secondary structure																																																																													.	.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.			.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.			.	.	.	100	.	.	.	.	.	.	.	.	.					110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																				.	.														.	.	.	.
Query SS confidence																				.	.														.	.	.	.
Query Sequence		R	G	S	A	F	A	Q	R	H	G	I	S	L	A	L	R	L	L	.	.	P	S	H	C	P	Q	L	E	Q	L	G	A	P	.	.	.	.	T	V	L	P	E	L	L	K	S	E	N	G	L	I	L	V	T	G	A	T	G	S	G	K	S	T	T	L	A	A	M	V	G	Y	L	N	Q	H	A	D	A	H	I
Query Conservation																				.	.														.	.	.	.
Alig confidence																				.	.														.	.	.	.																																					.
Template Conservation																																																																											.
Template Sequence		R	V	S	T	X	P	S	S	H	G	E	R	V	V	X	R	L	L	D	K	N	A	T	R	L	D	L	H	S	L	G	X	T	A	H	N	H	D	N	F	R	R	L	I	K	R	P	H	G	I	I	L	V	T	G	P	T	G	S	G	K	S	T	T	L	Y	A	G	L	Q	E	L	N	.	S	S	E	R	N	I
Template Known Secondary structure									T	T	S										T	T	T	T				G	G	G	S															T	S	S	S								S	T	T	S															.		T	T	S
Template Predicted Secondary structure																																																																											.
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.		.	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	L	E	D	P	V	E	Y	L	Y	A	S	Q	R	C	L	I	Q	Q	R	E	I	G	L	H	C	M	T	F	A	S	G	L	R	A	A	L	R	E	D	P	D	V	I	L	L	G	E	L	R	D	S	E	T	I	R	L	A	L	T	A	A	E	T	G	H	L	V	L	A	T	L	H	T	R	G	A	A	Q
Query Conservation
Alig confidence																											.	.	.
Template Conservation																											.	.	.
Template Sequence		L	T	V	E	D	P	I	E	F	D	I	D	G	I	G	Q	T	Q	V	N	P	R	V	D	X	.	.	.	T	F	A	R	G	L	R	A	I	L	R	Q	D	P	D	V	V	X	V	G	E	I	R	D	L	E	T	A	Q	I	A	V	Q	A	S	L	T	G	H	L	V	X	S	T	L	H	T	N	T	A	V	G
Template Known Secondary structure						S	S			S			S	S	S						B	G	G	G	T	B	.	.	.										G	G	G			S					S				S													T	T										S	S	S
Template Predicted Secondary structure																											.	.	.
Template SS confidence
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.				.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.																																					.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	V	E	R	L	V	D	S	F	P	A	Q	E	K	D	P	V	R	N	Q	L	A	G	S	L	R	A	V	L	S	Q	K	L	E	V	D	K	Q	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	V	A	L
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.
Template Sequence		A	V	T	R	L	R	D	X	.	.	.	.	.	.	G	I	E	P	F	L	I	S	S	S	L	L	G	V	L	A	Q	R	L	V	R	T	L	C	P	D	C	K	E	P	Y	E	A	D	K	E	Q	R	K	L	F	E	P	L	I	L	Y	R	A	T	G	C	P	K	C	N	H	K	G	Y	R	G	R	T	G	I
Template Known Secondary structure										.	.	.	.	.	.	T																								T	T	T												T	T													S	S	S		S	S	S
Template Predicted Secondary structure										.	.	.	.	.	.
Template SS confidence
		366	.	.	.	370	.	.	.							.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	E	L	L	I	N	T	P	A	V	G	N	L	I	R	E	G	K	T	H	Q	L	P	H	V	I	Q	T	G	Q	Q	V	G	M	I	T	F	Q	Q	S	Y	Q	H	R	V	G	E	G	R	L
Query Conservation
Alig confidence																								.	.	.
Template Conservation																								.	.	.
Template Sequence		H	E	L	L	L	V	D	D	A	L	Q	E	L	I	H	S	E	A	G	E	Q	A	.	.	.	X	E	K	H	I	R	A	T	T	P	S	I	R	D	D	G	L	D	K	V	R	Q	G	I	T
Template Known Secondary structure																	T	T						.	.	.							T	T														T	T	S	S
Template Predicted Secondary structure																								.	.	.
Template SS confidence
		445	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.				.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions