Job Description P52052 Confidence 97.83% Date Thu Jan 5 12:05:02 GMT 2012 Rank 39 Aligned Residues 80 % Identity 20% Template c3cf1C_ PDB info PDB header:transport protein Chain: C: PDB Molecule:transitional endoplasmic reticulum atpase; PDBTitle: structure of p97/vcp in complex with adp/adp.alfx Resolution 4.40 Å

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		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	V	L	P	E	L	L	K	S	E	N	G	L	I	L	V	T	G	A	T	G	S	G	K	S	T	T	L	A	A	M	V	G	Y	L	N	Q	H	A	D	A	H	I	L	T	L	E	D	P	V	E	Y	L	Y	A	S	Q	R	C	L	I	Q	Q	R	E	I	G	L	H	C	M	T	F	A	S	G	L	R	A
Query Conservation
Alig confidence																																						.	.	.	.								.										.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.								.										.	.	.	.	.	.	.	.	.
Template Sequence		P	D	K	F	L	K	F	G	M	T	P	S	K	G	V	L	F	Y	G	P	P	G	C	G	K	T	L	L	A	K	A	I	A	N	E	C	.	.	.	.	Q	A	N	F	I	S	I	.	K	G	P	E	L	L	T	M	W	.	.	.	.	.	.	.	.	.	F	G	E	S	E	A	N	V	R	E	I	F	D	K
Template Known Secondary structure							T	S						S								T	T	S													T	.	.	.	.	T							.										.	.	.	.	.	.	.	.	.	T	T	T		T							T	T	T
Template Predicted Secondary structure																																						.	.	.	.								.										.	.	.	.	.	.	.	.	.
Template SS confidence
		500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.					.	.	.	.	540	.	.		.	.	.	.	.	.	.	550	.										.	.	.	.	.	.	.	.	560	.	.	.	.	.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	R	E	D	P	D	V	I	L	L	G	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	R	Q	A	A	P	C	V	L	F	F	D	E	L
Template Known Secondary structure		T	T	T	T		S						S	S	G
Template Predicted Secondary structure
Template SS confidence
		566	.	.	.	570	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions