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Job DescriptionP52052
Confidence98.13%DateThu Jan 5 12:05:02 GMT 2012
Rank20Aligned Residues119
% Identity18%Templatec3b9pA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:cg5977-pa, isoform a; PDBTitle: spastin
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   98.100.........110........ .120.........130.........140.........150.........160
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Query Sequence  SHCPQLEQLGAPTVLPELLKS. . . . . . . . . . . . . . . . . ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVE
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Template Sequence  GAKVEWTDIAGQDVAKQALQEMVILPSVRPELFTGLRAPAKGLLLFGPPGNGKTLLARAVATEC. . . . SATFLNISAAS.
Template Known Secondary structure  SS


GGGS


T
GGGS
GGG


SSSSSS
T....T
STT.
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   477..480.........490.........500.........510.........520.........530.........540 .........550.
 
   161........170.........180.........190.........200.. .......210.........220.........230
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Query Sequence  YLYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGEL. . . . . . . . RDSETIRLALTAAETGHLVLATLHTRGA
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Template Sequence  . . . . . . . . . LTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSEREASRRLKTEFLVEFDGLPRIVVLAATNRP
Template Known Secondary structure  .........TSSSS
S
T
STGGGTSB



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S
G
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   552.......560.........570.........580.........590.........600.........610.........620
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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