Job Description P52052 Confidence 96.94% Date Thu Jan 5 12:05:02 GMT 2012 Rank 229 Aligned Residues 86 % Identity 12% Template c2z83A_ PDB info PDB header:viral protein Chain: A: PDB Molecule:helicase/nucleoside triphosphatase; PDBTitle: crystal structure of catalytic domain of japanese2 encephalitis virus ns3 helicase/nucleoside triphosphatase3 at a resolution 1.8 Resolution 1.80 Å

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		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.							.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.																												.	.	.	.	.	.
Query SS confidence																					.																												.	.	.	.	.	.
Query Sequence		L	K	S	E	N	G	L	I	L	V	T	G	A	T	G	S	G	K	S	.	T	T	L	A	A	M	V	G	Y	L	N	Q	H	A	D	A	H	I	L	T	L	E	D	P	V	E	Y	.	.	.	.	.	.	L	Y	A	S	Q	R	C	L	I	Q	Q	R	E	I	G	L	H	C	M	T	F	A	S	G	L	R	A
Query Conservation																					.																												.	.	.	.	.	.
Alig confidence																					.												.																.	.	.	.	.	.
Template Conservation																																	.
Template Sequence		M	L	R	K	R	Q	M	T	V	L	D	L	H	P	G	S	G	K	T	R	K	I	L	P	Q	I	I	K	D	A	I	.	Q	Q	R	L	R	T	A	V	L	A	P	T	R	V	V	A	A	E	M	A	E	A	L	R	G	L	P	V	R	Y	Q	T	G	N	E	I	V	D	V	M	C	H	A	T	L	T	H	R
Template Known Secondary structure		G	G	S	T	T									T	T	S		T	T	T	T											.		T	T									S											T	T	T	S										S
Template Predicted Secondary structure																																	.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		189	190	.	.	.				.	.	.	.	.	.	200	.	.
Predicted Secondary structure							.	.	.
Query SS confidence							.	.	.
Query Sequence		A	L	R	E	D	.	.	.	P	D	V	I	L	L	G	E	L
Query Conservation							.	.	.
Alig confidence							.	.	.
Template Conservation
Template Sequence		L	M	S	P	N	V	P	N	Y	N	L	F	V	M	D	E	A
Template Known Secondary structure				S							S					S	S	T
Template Predicted Secondary structure
Template SS confidence
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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