Job Description P52052 Confidence 96.35% Date Thu Jan 5 12:05:02 GMT 2012 Rank 368 Aligned Residues 66 % Identity 17% Template c2vsxA_ PDB info PDB header:translation/hydrolase Chain: A: PDB Molecule:atp-dependent rna helicase eif4a; PDBTitle: crystal structure of a translation initiation complex Resolution 2.8 Å

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		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120																			.	.	.	.	.	.	.	.	.	130	.	.	.	.	.			.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query Sequence		L	P	S	H	C	P	Q	L	E	Q	L	G	A	P	T	V	L	P	E	L	L	K	S	E	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	I	L	V	T	G	A	T	G	S	G	K	S	T	.	.	T	L	A	A	M	V	G	Y	L	N	Q	H	A	D	A	H	I	L	T	L
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Conservation
Template Sequence		Y	D	K	V	V	Y	K	F	D	D	M	E	L	D	E	N	L	L	R	G	V	F	G	Y	G	F	E	E	P	S	A	I	Q	Q	R	A	I	M	P	I	I	E	G	H	D	V	L	A	Q	A	Q	S	G	T	G	K	T	G	T	F	S	I	A	A	L	Q	R	I	D	T	S	V	K	A	P	Q	A	L	M	L
Template Known Secondary structure									G	G	G	G	T											T	T	T			S														T	T									T	T	S	S															T	T			S
Template Predicted Secondary structure
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		156	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	P	V	E	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	P	T	R	E	L
Template Known Secondary structure			S	S
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions